@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo2631: (2016-04-05 )
MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA
Atome Classification :
(20 SA)
.........10....-....20........30........40........50----.-----........60..-...-----...70....---....80........90..-.--.....100.......110......---------------.120-----------.--..-------------.....130.......140......-.-150-------------------------.......----.---.-----------------------160--........170......---------------.180-------------........----.190---........200.....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MPKL
S
L
L
KQDGTNA
G
-
E
I
T
LN
D
T
V
F
G
IEPN
E
K
V
V
V
D
V
I
L
S
Q
R
A
S
L
R
Q
G
T
H
K-----V-----K
N
R
S
E
VRGGGRK-PWR-----QKGTGRARQ---GSIRSPQWRGG
G
V
V
FGPT-P--
R
S
Y
A
Y
K
L
P
K
K
V
R
R
L
A
I
K
S
I
L
S
SKV---------------NE
E
------------
K
--
L
V
-------------
V
L
EGLTFDAP
K
T
K
E
F
A
A
F
L
K
NISV-D-
T
---------------------------
K
A
L
I
V
V
A----G---E-----------------------SE---
N
V
E
L
S
ARNLQ
G
I
T
V
IPA---------------E
S
---------------
I
S
V
L
E
VAK----HD
K
----
L
I
I
T
K
A
A
V
E
K
V
E
E
V
LA
1
PsiBlast_PDB
91.10
74%
-101
- C3 -
3J3V
-
RL4_BACSU
E:
[2-207]
-
P
K
V
A
L
Y
N
Q
N
G
S
T
A
G
-
D
I
E
L
N
A
S
V
F
G
I
E
P
N
E
S
V
V
F
D
A
I
L
M
Q
R
A
S
L
R
Q
G
T
H
K
-----
V
-----
K
N
R
S
E
V
R
G
G
G
R
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
Q
---
G
S
I
R
S
P
Q
W
R
G
G
G
V
V
F
G
P
T
-
P
--
R
S
Y
S
Y
K
L
P
K
K
V
R
R
L
A
I
K
S
V
L
S
S
K
V
---------------
I
D
N
------------
N
--
I
I
-------------
V
L
E
D
L
T
L
D
T
A
K
T
K
E
M
A
A
I
L
K
G
L
S
V
-
E
-
K
---------------------------
K
A
L
I
V
T
A
----
D
---
A
-----------------------
N
E
---
A
V
A
L
S
A
R
N
I
P
G
V
T
V
V
E
A
---------------
N
G
---------------
I
N
V
L
D
V
V
N
----
H
E
K
----
L
L
I
T
K
A
A
V
E
K
V
E
E
V
L
A
22
HHSearch
89.12
75%
-84
- C3 -
3J3W
-
RL4_BACSU
E:
[2-207]
-
P
K
V
A
L
Y
N
Q
N
G
S
T
A
G
-
D
I
E
L
N
A
S
V
F
G
I
E
P
N
E
S
V
V
F
D
A
I
L
M
Q
R
A
S
L
R
Q
G
T
H
K
-----
V
-----
K
N
R
S
E
V
R
G
G
G
R
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
Q
---
G
S
I
R
S
P
Q
W
R
G
G
G
V
V
F
G
P
T
-
P
--
R
S
Y
S
Y
K
L
P
K
K
V
R
R
L
A
I
K
S
V
L
S
S
K
V
---------------
I
D
N
------------
N
--
I
I
-------------
V
L
E
D
L
T
L
D
T
A
K
T
K
E
M
A
A
I
L
K
G
L
S
V
-
E
-
K
---------------------------
K
A
L
I
V
T
A
----
D
---
A
-----------------------
N
E
---
A
V
A
L
S
A
R
N
I
P
G
V
T
V
V
E
A
---------------
N
G
---------------
I
N
V
L
D
V
V
N
----
H
E
K
----
L
L
I
T
K
A
A
V
E
K
V
E
E
V
L
A
2
PsiBlast_PDB
88.86
74%
-84
- C3 -
3J3W
-
RL4_BACSU
E:
[2-207]
-
P
K
V
A
L
Y
N
Q
N
G
S
T
A
G
-
D
I
E
L
N
A
S
V
F
G
I
E
P
N
E
S
V
V
F
D
A
I
L
M
Q
R
A
S
L
R
Q
G
T
H
K
-----
V
-----
K
N
R
S
E
V
R
G
G
G
R
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
Q
---
G
S
I
R
S
P
Q
W
R
G
G
G
V
V
F
G
P
T
-
P
--
R
S
Y
S
Y
K
L
P
K
K
V
R
R
L
A
I
K
S
V
L
S
S
K
V
---------------
I
D
N
------------
N
--
I
I
-------------
V
L
E
D
L
T
L
D
T
A
K
T
K
E
M
A
A
I
L
K
G
L
S
V
-
E
-
K
---------------------------
K
A
L
I
V
T
A
----
D
---
A
-----------------------
N
E
---
A
V
A
L
S
A
R
N
I
P
G
V
T
V
V
E
A
---------------
N
G
---------------
I
N
V
L
D
V
V
N
----
H
E
K
----
L
L
I
T
K
A
A
V
E
K
V
E
E
V
L
A
10
PsiBlast_PDB
78.69
43%
-91
- C3 -
3J8G
-
?
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A
12
PsiBlast_PDB
77.95
43%
-139
- C3 -
1DMG
1
RL4_THEMA
A:
[2-225]
--
Q
V
D
L
L
N
V
K
G
E
K
V
G
-
T
L
E
I
S
D
F
V
F
N
I
D
P
N
Y
D
V
M
W
R
Y
V
D
M
Q
L
S
---------------------------------------------------------------------------
D
W
S
K
K
L
N
K
K
M
K
K
L
A
L
R
S
A
L
S
V
K
Y
---------------
R
E
N
------------
K
--
L
L
-------------
V
L
D
D
L
K
L
E
R
P
K
T
K
S
L
K
E
I
L
Q
N
L
Q
L
S
D
-
K
---------------------------
K
T
L
I
V
L
P
----
W
---
K
-----------------------
E
E
G
Y
M
N
V
K
L
S
G
R
N
L
P
D
V
K
V
I
I
A
---------------
D
N
PNNSKNGEKAVRIDG
L
N
V
F
D
M
L
K
----
Y
D
Y
----
L
V
L
T
R
D
M
V
S
K
I
E
E
V
L
G
24
HHSearch
77.66
36%
-96
- C3 -
3J7Y
-
RM04_HUMAN
F:
[67-274]
---
E
S
L
R
G
F
E
Q
E
R
V
G
-
L
A
D
L
H
P
D
V
F
A
T
A
P
R
L
D
I
L
H
Q
V
A
M
W
Q
K
N
F
K
R
I
S
Y
A
K
-----
T
-----
K
T
R
A
E
V
R
G
G
G
R
K
-
P
W
P
-----
Q
K
G
T
G
R
A
R
H
---
G
S
I
R
S
P
L
W
R
G
G
G
V
A
H
G
P
R
G
P
--
T
S
Y
Y
Y
M
L
P
M
K
V
R
A
L
G
L
K
V
A
L
T
V
K
L
---------------
A
Q
D
------------
D
--
L
H
-------------
I
M
D
S
L
E
L
P
T
G
D
P
Q
Y
L
T
E
L
A
H
Y
R
R
W
-
G
-
D
---------------------------
S
V
L
L
V
D
L
----
T
HEE
M
-----------------------
P
Q
---
S
I
V
E
A
T
S
R
L
K
T
F
N
L
I
P
A
---------------
V
G
---------------
L
N
V
H
S
M
L
K
----
H
Q
T
----
L
V
L
T
L
P
T
V
A
F
L
E
D
K
L
L
23
HHSearch
77.04
47%
-133
- C3 -
1DMG
1
RL4_THEMA
A:
[1-225]
-
A
Q
V
D
L
L
N
V
K
G
E
K
V
G
-
T
L
E
I
S
D
F
V
F
N
I
D
P
N
Y
D
V
M
W
R
Y
V
D
M
Q
L
S
---------------------------------------------------------------------------
D
W
S
K
K
L
N
K
K
M
K
K
L
A
L
R
S
A
L
S
V
K
Y
---------------
R
E
N
------------
K
--
L
L
-------------
V
L
D
D
L
K
L
E
R
P
K
T
K
S
L
K
E
I
L
Q
N
L
Q
L
-
S
-
D
K--------------------------
K
T
L
I
V
L
P
----
W
KE
E
G
-----------------------
Y
M
---
N
V
K
L
S
G
R
N
L
P
D
V
K
V
I
I
A
DNPNNSKNGEKAVRI
D
G
---------------
L
N
V
F
D
M
L
K
----
Y
D
Y
----
L
V
L
T
R
D
M
V
S
K
I
E
E
V
L
G
34
Fugue
74.00
38%
-129
* C3 *
1DMG
1
RL4_THEMA
A:
[1-225]
-
A
Q
V
D
L
L
N
V
K
G
E
K
V
G
-
T
L
E
I
S
D
F
V
F
N
I
D
P
N
Y
D
V
M
W
R
Y
V
D
M
Q
L
S
D
---------------------------------------------------------------------------
W
S
K
K
L
N
K
K
M
K
K
L
A
L
R
S
A
L
S
V
K
Y
---------------
R
E
------------------NK
L
L
---------
V
L
D
D
L
K
L
E
R
P
K
T
K
S
L
K
E
I
L
Q
N
L
Q
L
-
S
D
K
---------------------------
K
T
L
I
V
L
P
----
W
KE
E
G
-----------------------
Y
M
---
N
V
K
L
S
G
R
N
L
P
D
V
K
V
I
I
A
DNPNNSKNGEKAVRI
D
G
---------------
L
N
V
F
D
M
L
K
----
Y
D
Y
----
L
V
L
T
R
D
M
V
S
K
I
E
E
V
L
G
35
Fugue
73.78
37%
-132
- C3 -
1DMG
1
RL4_THEMA
A:
[1-225]
-
A
Q
V
D
L
L
N
V
K
G
E
K
V
G
-
T
L
E
I
S
D
F
V
F
N
I
D
P
N
Y
D
V
M
W
R
Y
V
D
M
Q
L
---------------------------------------------------------------------------
S
D
W
S
K
K
L
N
K
K
M
K
K
L
A
L
R
S
A
L
S
V
K
Y
---------------
R
E
N
------------
K
--
L
L
-------------
V
L
D
D
L
K
L
E
R
P
K
T
K
S
L
K
E
I
L
Q
N
L
Q
L
-
S
-
D
---------------------------
K
K
T
L
I
V
L
P
W
KE
E
---
G
-----------------------
Y
M
---
N
V
K
L
S
G
R
N
L
P
D
V
K
V
I
I
A
DNPNNSKNGEKAVRI
D
G
---------------
L
N
V
F
D
M
L
K
----
Y
D
Y
----
L
V
L
T
R
D
M
V
S
K
I
E
E
V
L
G
20
PsiBlast_PDB
72.16
35%
-63
- C3 -
4U67
-
?
C:
[2-193]
-
A
Q
I
N
V
I
G
Q
N
G
G
R
T
I
-
E
L
P
L
P
------
E
V
N
S
G
V
L
H
E
V
V
T
W
Q
L
A
S
R
R
R
G
T
A
S
-----
T
-----
R
T
R
A
Q
V
S
K
T
G
R
K
-
M
Y
G
-----
Q
K
G
T
G
N
A
R
H
---
G
D
R
S
V
P
T
F
V
G
G
G
V
A
F
G
P
K
-
P
--
R
S
Y
D
Y
T
L
P
R
Q
V
R
Q
L
G
L
A
M
A
I
A
S
R
Q
---------------
E
G
G
------------
K
--
L
V
-------------
A
V
D
G
F
D
I
A
D
A
K
T
K
N
F
I
S
W
A
K
Q
N
G
L
-
D
-
G
---------------------------
T
E
K
V
L
L
V
----
T
---
D
-----------------------
D
E
---
N
T
R
R
A
A
R
N
V
S
W
V
S
V
L
P
V
---------------
A
G
---------------
V
N
V
Y
D
I
L
R
----
H
D
R
----
L
V
I
D
A
A
A
L
--------
19
PsiBlast_PDB
70.78
35%
-61
- C3 -
2ZJQ
-
RL4_DEIRA
C:
[2-193]
-
A
Q
I
N
V
I
G
Q
N
G
G
R
T
I
-
E
L
P
L
P
------
E
V
N
S
G
V
L
H
E
V
V
T
W
Q
L
A
S
R
R
R
G
T
A
S
-----
T
-----
R
T
R
A
Q
V
S
K
T
G
R
K
-
M
Y
G
-----
Q
K
G
T
G
N
A
R
H
---
G
D
R
S
V
P
T
F
V
G
G
G
V
A
F
G
P
K
-
P
--
R
S
Y
D
Y
T
L
P
R
Q
V
R
Q
L
G
L
A
M
A
I
A
S
R
Q
---------------
E
G
G
------------
K
--
L
V
-------------
A
V
D
G
F
D
I
A
D
A
K
T
K
N
F
I
S
W
A
K
Q
N
G
L
-
D
-
G
---------------------------
T
E
K
V
L
L
V
----
T
---
D
-----------------------
D
E
---
N
T
R
R
A
A
R
N
V
S
W
V
S
V
L
P
V
---------------
A
G
---------------
V
N
V
Y
D
I
L
R
----
H
D
R
----
L
V
I
D
A
A
A
L
--------
11
PsiBlast_PDB
69.42
43%
-48
- C3 -
5AKA
-
RL4_ECOLI
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A
5
PsiBlast_PDB
69.19
43%
-47
- C3 -
3BBX
-
RL4_ECOLI
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A
26
HHSearch
65.66
29%
-53
- C3 -
2WWB
-
RL4B_YEAST
H:
[3-263]
R
P
Q
V
T
V
H
S
L
T
G
E
A
T
A
N
A
L
P
L
P
-
A
V
F
S
A
P
I
R
P
D
I
V
H
T
V
F
T
S
V
N
K
N
K
R
Q
A
Y
A
V
-----
S
EKAGH
Q
T
S
A
E
S
W
G
T
G
R
A
-
V
A
R
IPRVG
G
G
G
T
G
R
S
G
Q
---
G
A
--
F
G
N
M
C
R
G
G
R
M
F
A
P
T
-
K
TW
R
K
W
N
V
K
V
N
H
N
E
K
R
Y
A
T
A
S
A
I
A
A
T
A
VASLVLARGHRVEKI
P
E
I
------------
P
--
L
V
-------------
V
S
T
D
L
E
-
S
I
Q
K
T
K
E
A
V
A
A
L
K
A
V
G
A
-
H
-
S
DLLKVLKSKKLRAGKGKYRNRRWTQRR
G
P
L
V
V
Y
A
--------
E
-----------------------
D
N
---
G
I
V
K
A
L
R
N
V
P
G
V
E
T
A
N
V
---------------
A
S
---------------
L
N
L
L
Q
L
A
P
GAHL
G
R
F
----
V
I
W
T
E
A
A
F
T
K
L
D
Q
V
W
G
37
Fugue
64.10
21%
-42
- C3 -
1JJ2
-
RL4_HALMA
C:
[1-246]
-
M
Q
A
T
I
Y
D
L
D
G
N
T
D
G
-
E
V
D
L
P
-
D
V
F
E
T
P
V
R
S
D
L
I
G
K
A
V
R
A
A
Q
A
N
R
K
Q
-
D
Y
G
-----
S
-----
D
E
Y
A
G
L
R
T
P
A
E
S
-
F
G
S
-----
G
R
G
Q
A
H
V
P
K
LDG
R
A
R
R
V
P
Q
A
V
K
G
R
S
A
H
P
P
K
-
T
E-
K
D
R
S
L
D
L
N
D
K
E
R
Q
L
A
V
R
S
A
L
A
A
T
A
---------------
D
A
D
------------
L
--
V
A
D
R
G
H
E
F
DRDEVP
V
V
V
S
D
D
F
E
D
L
V
K
T
Q
E
V
V
S
L
L
E
A
L
D
V
-
H
-
A
---------------------------
D
I
D
R
A
D
E
----
T
---
K
IKAGQGSARGRK
Y
R
R
P
A
S
I
L
F
V
T
S
D
---
E
P
S
T
A
A
R
N
L
A
G
A
D
V
A
T
A
---------------
S
E
---------------
V
N
T
E
D
L
A
P
----
G
G
A
PGRL
T
V
F
T
E
S
A
L
A
E
V
A
E
R
--
4
PsiBlast_PDB
53.69
43%
113
- C- -
2RDO
-
RL4_ECOLI
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A
25
HHSearch
53.35
27%
5
- C3 -
1VQ8
-
RL4_HALMA
C:
[4-246]
-
M
Q
A
T
I
Y
D
L
D
G
N
T
D
G
-
E
V
D
L
P
-
D
V
F
E
T
P
V
R
S
D
L
I
G
K
A
V
R
A
A
Q
A
N
R
K
Q
D
Y
G
S
DEYAG
L
-----
R
T
P
A
E
S
F
G
S
G
R
G
Q
A
H
V
-----
P
K
L
D
G
R
A
R
-------
R
V
P
Q
A
V
K
G
R
S
A
H
P
P
K
-
T
E-
K
D
R
S
L
D
L
N
D
K
E
R
Q
L
A
V
R
S
A
L
A
A
T
A
---------------
D
A
D
L
V
A
D
R
G
H
E
F
DRD
E
VP
V
V
-------------
V
S
D
D
F
E
-
D
L
V
K
T
Q
E
V
V
S
L
L
E
A
L
D
V
-
H
-
A
D
I
D
R
A
DETKIKAGQGSARGRK
Y
R
R
P
A
-
S
I
L
F
V
T
S
----
D
--------------------------------
E
P
S
T
A
A
R
N
L
A
G
A
D
V
A
T
A
---------------
S
E
---------------
V
N
T
E
D
L
A
P
GGAP
G
R
L
----
T
V
F
T
E
S
A
L
A
E
V
A
E
R
--
9
PsiBlast_PDB
52.37
43%
27
- C3 -
4UY8
17
RL4_ECOLI
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A
8
PsiBlast_PDB
52.27
43%
27
- C3 -
3J7Z
-
RL4_ECOLI
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A
3
PsiBlast_PDB
52.11
43%
33
- C3 -
2J28
-
RL4_ECOLI
E:
[1-201]
---
M
E
L
V
L
K
D
A
Q
S
A
---
L
T
V
S
E
T
T
F
G
R
D
F
N
E
A
L
V
H
Q
V
V
V
A
Y
A
A
G
A
R
Q
G
T
R
A
-----
Q
-----
K
T
R
A
E
V
T
G
S
G
K
K
-
P
W
R
-----
Q
K
G
T
G
R
A
R
S
---
G
S
I
K
S
P
I
W
R
S
G
G
V
T
F
A
A
R
-
P
--
Q
D
H
S
Q
K
V
N
K
K
M
Y
R
G
A
L
K
S
I
L
S
E
L
V
---------------
R
Q
D
------------
R
--
L
I
-------------
V
V
E
K
F
S
V
E
A
P
K
T
K
L
L
A
Q
K
L
K
D
M
A
L
-
E
-
D
-----------------------------
V
L
I
I
T
----
G
---
E
L----------------------
D
E
---
N
L
F
L
A
A
R
N
L
H
K
V
D
V
R
D
A
---------------
T
G
---------------
I
D
P
V
S
L
I
A
----
F
D
K
----
V
V
M
T
A
D
A
V
K
Q
V
E
E
M
L
A