@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0137: (2015-11-28 )
MSVLEIKNLHVSIEDKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEVDERARLGLFLAMQYPSEVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRGEGFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV

Atome Classification :

(20 SA) -.........10...----.--.---...20........30........40........50........60........70--....--..--...80-------....-----....90.........100.......110...-------....120.--......130.......140..----.--....150.......160.......170.......180.......190-.-.-.....200.......210.......220.......230.......240.....--------------------------..250....-------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -MSVLEIKNLHVSIE----D--K---EILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDIL---ELEV--DE--RARLG-------LFLA-----MQYPS-EVPGITNAEFIRAAMNAGKADDDKI-------SIRQFITK--LDEKMELLGMKEEMAERYLNE----G--FSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMR-G-E-GFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEE--------------------------LGLEYKEEV-------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 95.4562%-113 - C1 -2D2E ? A:[2-245] --SQLEIRDLWASID----G--E---TILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENIL---ELSP--DE--RARKG-------LFLA-----FQYPV--VPGVTIANFLRLALQAKLGRE--V-------GVAEFWTK--VKKALELLDWDESYLSRYLNE----------GEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMR-G-P-NFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELEAKGYEWLKEK------------------------------------------------------------------------------------------------------------------------------------------
58 HHSearch 94.5963%-112 - C1 -2D2E ? A:[2-241] --SQLEIRDLWASID----G--E---TILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENIL---ELSP--DE--RARKG-------LFLA-----FQYPV--VPGVTIANFLRLALQAKLGRE--V-------GVAEFWTK--VKKALELLDWDESYLSRYLNE----------GEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMR-G-P-NFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELEAKGYEWLKEK------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 94.5562%-110 - C1 -2D2F ? A:[2-246] --SQLEIRDLWASID----G--E---TILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENIL---ELSP--DE--RARKG-------LFLA-----FQYPV-EVPGVTIANFLRLALQAKLGRE--V-------GVAEFWTK--VKKALELLDWDESYLSRYLNE----G--FSGGEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMR-G-P-NFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELEAKGYEWLKEK--------------------------VK--------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 86.3151% -92 - C1 -2ZU0 SUFC_ECOLI C:[20-266] ---MLSIKDLHVSVE----D--K---AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL---ALSP--ED--RAGEG-------IFMA-----FQYPV-EIPGVSNQFFLQTALNAVRSYRGQE-------TLDRFDFQDLMEEKIALLKMPEDLLTRSVNV----G--FSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLR-D-G-KRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLTEQ------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 82.6651% -97 - C1 -2D3W - SUFC_ECOLI A:[1-244] ---MLSIKDLHVSVE----D--K---AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL---ALSP--ED--RAGEG-------IFMA-----FQYPV-EIPGVSNQFFLQTALNAVRSYRGQE-------TLDRFDFQDLMEEKIALLKMPEDLLTRSVNV----G--FSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLR-D-G-KRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL---------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 66.9932% -90 - C1 -4WBS ? A:[38-262] --SSLVVRNLKKRYG----S--R---TVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVG--LVPLDAGEIDLDGKSIS---LLPI--HK--RASLG-------LSYL-----PQEAS-VFRKLSVEENIRAVLELQVGDDGKR-------LSKDAIAS--RTE-----ALLDELQISHLRENPALS--LSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLK-Q-R-NIGVLITDHNVRETLGIC-DHAYIISDGSVLAAGAPGDIIENESVRRVYLGEH--------------------------FRM-------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 65.3032% -86 - C1 -4WBS ? B:[38-262] --SSLVVRNLKKRYG----S--R---TVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVG--LVPLDAGEIDLDGKSIS---LLPI--HK--RASLG-------LSYL-----PQEAS-VFRKLSVEENIRAVLELQVG--GKR-------LSKDAIAS--RTE-----ALLDELQISHLRENPALS--LSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLK-Q-R-NIGVLITDHNVRETLGIC-DHAYIISDGSVLAAGAPGDIIENESVRRVYLGEH--------------------------FRM-------------------------------------------------------------------------------------------------------------
46 HHSearch 64.8729% -88 - C1 -2IT1 - ? A:[1-222] -MVEIKLENIVKKFG----N--F---TALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAG--IYKPTSGKIYFDEKDVT---ELPP--K-----DRN-------VGLV-----FQNWA-LYPHMTVYKNIAFPLELRKAP------------REEIDKK--VREVAKMLHIDK-LLN-RYPW----Q--LSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE-L-GITTVYVTHDQAEAL-AMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLG--------------------------NPPMNFVEA-------------------------------------------------------------------------------------------------------
72 Fugue 63.5025% -74 - C1 -1OXS ? C:[1-352] -MVRIIVKNVSKVFKKG--K--V---VALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLD--VPSTGELYFDDRLVASNGKLIV--PP--EDR-K-------IGMV-----FQTWA-LYPNLTAFENIAFPLTN-----MKM-------SKEEIRKR--VEEVAKILDIHHVLNHF--PR----E--LSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQ-S-RLGVTLLVVSHDPADIFAI-ADRVGVLVKGKLVQVGKPEDLYD--NPVSIQVASL--------------------------IGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK
47 HHSearch 62.5625% -97 - C1 -1V43 - ? A:[10-231] -MVEVKLENLTKRFG----N--F---TAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAG--LEEPTEGRIYFGDRDVT---YLPP--K-----DRN-------ISMV-----FQ-------HMTVYENIAFPL--KKFP------------KDEIDKR--VRWAAELLQIEE-LL-NRYPA----Q--LSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQ-QKL-KVTTIYVTHDQVEAM-TMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIG--------------------------APEMNILEV-------------------------------------------------------------------------------------------------------
62 HHSearch 62.3926% -82 - C1 -2OLJ ? A:[22-247] -LQMIDVHQLKKSFG----S--L---EVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNL--LEDFDEGEIIIDGINLK---AKDTN-LN--KVREE-------VGMV-----FQRFN-LFPHMTVLNNITLAPMKVRKW-----------PREKAEAK--AMELLDKVGLKDK-A-HAYPD----S--LSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLA-N-E-GMTMVVVTHEMGFAR-EVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLS--------------------------KVF-------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 62.3529% -68 - C1 -4F4C - PGP1_CAEEL A:[1079-1306] ------FKNVRFAYP----E--RPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALL--ERFYDTLGGEIFIDGSEIK---TLN---PE--HTRSQ-------IAIV-----SQEPT--LFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAE--LPE-----GFETRVGDR--GT----Q--LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAR---E-GRTCIVIAH--RLNTVMNADCIAVVSNGTII-----------EKGTHTQLMSE--------------------------K---------------------------------------------------------------------------------------------------------------
74 Fugue 62.0120% -66 - C1 -1Z47 ? A:[11-355] GSMTIEFVGVEKIYPG---G--A---RSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLE--RPTKGDVWIGGKRVT---DLPP--QK--R---N-------VGLV-----FQNYA-LFQHMTVYDNVSFGLRE-----KRV-------PKDEMDAR--VRELLRFMRLESYANRF--PH----E--LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVH-D-EMGVTSVFVTHDQEEALEV-ADRVLVLHEGNVEQFGTPEEVYE--KPGTLFVASF--------------------------IGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR--
24 PsiBlast_CBE 61.4131% -83 - C1 -4M1M MDR1A_MOUSE B:[1048-1247] ---------------------------VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLL--ERFYDPMAGSVFLDGKEIK---QLNV--QWL-RAQLGIVSQEPILFDCSIAENIAYGD-NSRVVSYEEIVRAAKEA---------------NIHQFIDS--LPDKYN---------TRVGDK----GTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAR---E-GRTCIVIAH--RLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQ--------------------------A---------------------------------------------------------------------------------------------------------------
53 HHSearch 61.2724% -81 - C1 -1OXX ? K:[1-229] -MVRIIVKNVSKVFK----KGKV---VALDNVNINIENGERFGILGPSGAGKTTFMRIIAG--LDVPSTGELYFDDRLVA---SNGKLIVP--PEDRK-------IGMV-----FQTWA-LYPNLTAFENIAFPLTNMKM------------SKEEIRKR--VEEVAKILDIHH-VL-NHFPR----E--LSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSR-L-GVTLLVVSHDPADIF-AIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIG--------------------------EINELEGKV-------------------------------------------------------------------------------------------------------
75 Fugue 61.1622% -80 - C1 -3TUZ METN_ECOLI H:[23-362] --HMIKLSNITKVFHQGTRT--I---QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TEGSVLVDGQELT---TLSE--SELTKARRQ-------IGMI-----FQHFN-LLSSRTVFGNVALPLELDNTPK------------DEVKRR--VTELLSLVGLGDK-HDSYPSN-------LSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDIN-R-RLGLTILLITHEMDVVKRIC-DCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV-----------------------------------------
13 PsiBlast_PDB 60.9431% -86 - C1 -4Q9H - MDR1A_MOUSE A:[1048-1247] ---------------------------VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLL--ERFYDPMAGSVFLDGKEIK---QLNV--QWL-RAQLGIVSQEPILFDCSIAENIAYGD-NSRVVSYEEIVRAAKEA---------------NIHQFIDS--LPDKYN---------TRVGDK----GTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAR---E-GRTCIVIAH--RLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQ--------------------------AGA-------------------------------------------------------------------------------------------------------------
49 HHSearch 60.5024% -88 - C1 -2YYZ ? A:[2-222] --PSIRVVNLKKYFG----K--V---KAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAG--IYKPTSGEIYFDDVLVN---DIPP--K-----YRE-------VGMV-----FQNYA-LYPHMTVFENIAFPLRARRIS------------KDEVEKR--VVEIARKLLIDN-LL-DRKPT----Q--LSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQE-L-GITSVYVTHDQAEAM-TMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIG--------------------------NPPTNFLRD-------------------------------------------------------------------------------------------------------
63 HHSearch 60.3629% -83 - C1 -3GFO ECFA3_CLOP1 A:[5-233] -DYILKVEELNYNYS----DG-T---HALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNG--ILKPSSGRILFDNKPID---YSRKG-IM--KLRES-------IGIV-----FQDPDNQLFSASVYQDVSFGAVNMKL------------PEDEIRKR--VDNALKRTGIEH-L-KDKPTH----C--LSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKE-L-GITIIIATHDIDIVP-LYCDNVFVMKEGRVILQGNPKEVFAEKEVIRKVNLRL--------------------------PRIGHLMEI-------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 60.1731% -86 - C1 -4Q9K - MDR1A_MOUSE A:[1048-1247] ---------------------------VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLL--ERFYDPMAGSVFLDGKEIK---QLNV--QWL-RAQLGIVSQEPILFDCSIAENIAYGD-NSRVVSYEEIVRAAKEA---------------NIHQFIDS--LPDKYN---------TRVGDK----GTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAR---E-GRTCIVIAH--RLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQ--------------------------AGAKRSLE--------------------------------------------------------------------------------------------------------