@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Rv0884c: (2016-04-26 )
MADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL

Atome Classification :

(20 SA) .........10........20......---..30....----....-40.-------.---..--...-..50........60........70.-.......80.-.......90......----.--.100-........110---.......120.......130...-------..-------....-------140---.--..-......150.......160..----..-----..----.170.......180.......--190.........200.......210.......220.......230.......240.-......250.......260.......270---.......280.......290......-.300.-......310......-.--320...--......330.......340.......350.......360.......370....-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MADQLTPHLEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTT-T-A-------A---AL--FGT-SHRQAPVKNLVGRVRSGLAELFSLP-DGYEVILGNG-GATAFWDAAAFGLID----K--RSL--HLTYGEFSAKF---ASAVSKNPFVGEPIIITS--DPG-------SA-------PEPQ-------T-----D--PS-VDVIAWAHNETSTGVAVAVRR----PE-----GS----DDALVVIDATSGAGGLPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNG---GLDWAVKRTADSSQRLYSWAQERPYT-TPFVT-DPGLRSQVVGTIDFV-D--D--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL-
2 PsiBlast_PDB 99.03100%-100 - C1 -3VOM SERC_MYCTU A:[31-398] --------LEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTT-T-A-------A---AL--FGT-SHRQAPVKNLVGRVRSGLAELFSLP-DGYEVILGNG-GATAFWDAAAFGLID----K--RSL--HLTYGEFSAKF---ASAVSKNPFVGEPIIITS--DPG-------SA-------PEPQ-------T-----D--PS-VDVIAWAHNETSTGVAVAVRR----PE-----GS----DDALVVIDATSGAGGLPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNG---GLDWAVKRTADSSQRLYSWAQERPYT-TPFVT-DPGLRSQVVGTIDFV-D--D--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL-
1 PsiBlast_PDB 98.70100%-101 - C1 -2FYF SERC_MYCTU A:[30-398] -------HLEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTT-T-A-------A---AL--FGT-SHRQAPVKNLVGRVRSGLAELFSLP-DGYEVILGNG-GATAFWDAAAFGLID----K--RSL--HLTYGEFSAKF---ASAVSKNPFVGEPIIITS--DPG-------SA-------PEPQ-------T-----D--PS-VDVIAWAHNETSTGVAVAVRR----PE-----GS----D-ALVVIDATSGAGGLPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNG---GLDWAVKRTADSSQRLYSWAQERPYT-TPFVT-DPGLRSQVVGTIDFV-D--D--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL-
22 PsiBlast_CBE 98.59100%-104 - C1 -2FYF SERC_MYCTU B:[30-398] -------HLEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTT-T-A-------A---AL--FGT-SHRQAPVKNLVGRVRSGLAELFSLP-DGYEVILGNG-GATAFWDAAAFGLID----K--RSL--HLTYGEFSAKF---ASAVSKNPFVGEPIIITS--DPG-------SA-------PEPQ-------T-----D--PS-VDVIAWAHNETSTGVAVAVRR----PE-----GS----D-ALVVIDATSGAGGLPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNG---GLDWAVKRTADSSQRLYSWAQERPYT-TPFVT-DPGLRSQVVGTIDFV-D--D--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL-
21 PsiBlast_CBE 98.44100%-100 - C1 -3VOM SERC_MYCTU B:[31-398] --------LEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTT-T-A-------A---AL--FGT-SHRQAPVKNLVGRVRSGLAELFSLP-DGYEVILGNG-GATAFWDAAAFGLID----K--RSL--HLTYGEFSAKF---ASAVSKNPFVGEPIIITS--DPG-------SA-------PEPQ-------T-----D--PS-VDVIAWAHNETSTGVAVAVRR----PE-----GS----DDALVVIDATSGAGGLPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNG---GLDWAVKRTADSSQRLYSWAQERPYT-TPFVT-DPGLRSQVVGTIDFV-D--D--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL-
35 HHSearch 96.0198% -99 - C1 -2FYF SERC_MYCTU A:[30-397] -------HLEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTT-T-A-------A---AL--FGT-SHRQAPVKNLVGRVRSGLAELFSLP-DGYEVIL-GNGGATAFWDAAAFGLIDK---R--SLH--LTY-GEFSAKF---ASAVSKNPFVGEPIIITS--DPG-------SA-------PEPQ-------T-----D--PS-VDVIAWAHNETSTGVAVAVRR----PE-----GS----D-ALVVIDATSGAGGLPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNG---GLDWAVKRTADSSQRLYSWAQERPYT-TPFVT-DPGLRSQVVGTIDFV-D--D--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER--
6 PsiBlast_PDB 66.8020% -81 - C1 -2DR1 ? A:[12-379] ---------EVYEMVKPKYKLFTAGPV---ACFPEVLE----IMKV-Q--------------M--F---SHRSKEYRKVHMDTVERLREFLEVE-KG-EVLLVPS-SGTGIMEASIRNGVS----KGGKVL--VTIIGAFGKRY---KEVVESNG--RKAVVLEY--EPG-------KA-------VKPEDLDDALRK-----N--PD-VEAVTITYNETSTGVLNPL------PELAKVAKE----HDKLVFVDAVSAMGGADIKFD--KWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERG-W---YFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMG---GKEKWLEMYEKRAKMVREGVRE--IG-LDILA-EPGHESPTITAVLTP-P--G--IKG--DEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINEL-
3 PsiBlast_PDB 64.7725% -86 - C1 -3FFR ? A:[8-357] ---------------------FTPGPS---ELYPTVRQ----HMIT-A-L-------D---EK--IGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFL-A-SATEIWERIIQNCVE----K--KSF--HCVNGSFSKRFYEFAGELGREAYKEEAAF-----GKG-------FY-------PADI-------T-----V--PADAEIICLTHNETSSGVSMPVEDINTFRD-----KN----KDALIFVDAVSSLPYPKFDWT--K--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEK-ARVNQTPETPNAMNIFLLGK----VTGDMLQISADGIRKQTEEKAALINTYIESSKVF-SFGVE-DAKLRSMT--TIVAN-T--T--MLP--GEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTL--------
34 HHSearch 62.9420% -76 - C1 -2DR1 ? A:[15-378] ------------EMVKPKYKLFTAGPV---ACFPEVLE----IMKV---------------QM----F-SHRSKEYRKVHMDTVERLREFLEVE-KG-EVLLVPS-SGTGIMEASIRNGVSKG--G--KVL--VTIIGAFGKRY---KEVVESNGR--KAVVLEY--EPG-------KA-------VKPE-------DLDDALRKNPD-VEAVTITYNETSTGVLNPLPE----LA-----KVAKE-HDKLVFVDAVSAMGGADIKFDKWG--LDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPE----RGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMG---GKEKWLEMYEKRAKMVREGVREI-GL-DILAE-P-GHESPTITAVLTP-P--G--IKG--DEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE--
36 HHSearch 61.1120% -77 - C1 -3M5U SERC_CAMJE A:[4-359] ----------------MRKINFSAGPS---TLPLEILE----QAQKELCD-------YQGRGYSIMEI-SHRTKVFEEVHFGAQEKAKKLYELN-DDYEVLFLQG-GASLQFAMIPMNLALN---G--VCE--YANTGVWTKKA---IKEAQILGV--NVKTVAS--SEES------NF-------DHIP-------RVEF--S--DN-ADYAYICSNNTIYGTQYQN------YP-----K-----TKTPLIVDASSDFFSRKVDFS--N--IALFYGGVQKNAG-ISGLSCIFIRKDMLERSKNK-----QIPSMLNYLTHA----ENQSLFNTPPTFAIYMFNLEMDWLLNQG---GLDKVHEKNSQKATMLYECIDLSNGFYKGHAD--KKDRSLMNVSFNIA-KNKD--LE---PLFVKEAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEFMKEFQGK--
54 Fugue 60.2620% -82 - C1 -1BJO SERC_ECOLI A:[1-360] -----------------QIFNFSSGPA---MLPAEVLK----QAQQ-E-LRDWNGLGT---SV--MEV-SHRGKEFIQVAEEAEKDFRDLLNVP-SNYKVLFCHG-GGRGQFAAVPLNILGDK--T--TAD--YVDAGYWAASA---IKEAKKYCTPNVFDAKVT--V--DGLRAVKPM-------REWQ-------L-----S--DN-AAYMHYCPNETIDGIAID-ET----PD-----FG----ADVVVAADFSSTILSRPIDVS--R--YGVIYAGAQKNIGPAG-LTIVIVREDLLGK------ANIACPSILDYSILNDN----GSMFNTPPTFAWYLSGLVFKWLKANG---GVAEMDKINQQKAELLYGVIDNS-DF-YRNDV-AKRNRSRMNVPFQLA-D--S--ALD--KLFLEESFAAGLHALKGHRVVGG--MRASIYNAMPLEGVKALTDFMVEFERRHG
11 PsiBlast_PDB 59.3621% -79 - C1 -2BI1 SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
16 PsiBlast_PDB 59.2421% -81 - C1 -2BIA SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
45 HHSearch 59.2223% -77 - C1 -3FFR ? A:[2-361] ---------------MNNKIYFTPGPS---ELYPTVRQ----HMITAL-D-------E---KI--GVI-SHRSKKFEEVYKTASDNLKTLLELPSNY-EVLF-LA-SATEIWERIIQNCVEK---K--SFH--CVN-GSFSKRF---YEFAGELGR--EAYKEEA--AFG-------KG-------FYPA-------DITV--P--AD-AEIICLTHNETSSGVSMPVED----IN-----TFRDKNKDALIFVDAVSSLPYPKFDWT--K--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEK-ARVNQTPETPNAMNIFLLGKVTGDMLQIS----ADGIRKQTEEKAALINTYIESS-KV-FSFGVEDAKLRSM-TTIVANT-T-----MLP--GEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI----
10 PsiBlast_PDB 59.1821% -79 - C1 -2BHX SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
42 HHSearch 59.1122% -86 - C1 -3E77 SERC_HUMAN A:[53-374] ------------------------------------------------------------------------SSDFAKIINNTENLVRELLAVP-DNYKVIFLQG-GGCGQFSAVPLNLIGLKAGR--CAD--YVVTGAWSAKA---AEEAKKFGT--INIVHPKLGSYT-------KI-------PDPS-------TWNL--N--PD-ASYVYYCANETVHGVEFDFIP-----D-----V-----KGAVLVCDMSSNFLSKPVDVS--K--FGVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRE------CPSVLEYKVQA----GNSSLYNTPPCFSIYVMGLVLEWIKNNG---GAAAMEKLSSIKSQTIYEIIDNSQGF-YVCPV-EPQNRSKMNIPFRIG-N--AKGDDALEKRFLDKALELNMLSLKGHRS--VGGIRASLYNAVTIEDVQKLAAFMKKFLEM--
15 PsiBlast_PDB 58.9821% -81 - C1 -2BI9 SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
13 PsiBlast_PDB 58.7321% -79 - C1 -2BI3 SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
14 PsiBlast_PDB 58.6821% -81 - C1 -2BI5 SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
12 PsiBlast_PDB 58.6721% -79 - C1 -2BI2 SERC_BACAO A:[6-353] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLR-NE-E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------
20 PsiBlast_PDB 58.4221% -79 - C1 -2BIG SERC_BACAO A:[7-354] --------------------NFNAGPSALPKPALERAQKELLNFND-T-Q-------M---SV--MEL-SHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQG-GASLQFTMLPMNLLT----K--GTIGNYVLTGSWSEK------ALKEAKLLGETHIAAS--TKA-------NSYQSIPDFSEFQ-------L-----N--EN-DAYLHITSNNTIYGTQYQ-NF----PE------I----NHAPLIADMSSDILSRPLKVN--Q--FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS----DSLYNTPPTFSIYMLRNVLDWIKDLG---GAEAIAKQNEEKAKIIYDTIDESNGF-YVGHA-EKGSRSLMNVTFNLRNE--E--LNQ--QFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM--------