@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1630: (2016-03-27 )
MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQLIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKNVGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEVHDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFRTAEDVARVSQKYDAVLVGEALMREATPEVAAKSLKVTR

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

137_B_2(1LBF)
TRPC_SULSO
[Raw transfer]



137_B_2(1LBL)
TRPC_SULSO
[Raw transfer]



137_P_8(1JCM)
TRPC_ECOLI
[Raw transfer]



IGP_A_2(3T44)
TRPC_MYCTU
[Raw transfer]



4RG_A_2(3T55)
TRPC_MYCTU
[Raw transfer]



BE2_A_3(3T44)
TRPC_MYCTU
[Raw transfer]



UNL_B_6(3TSM)
TRPC_BRUA2
[Raw transfer]



MES_B_2(1JUL)
TRPC_SULSO
[Raw transfer]



5RG_A_2(3T78)
TRPC_MYCTU
[Raw transfer]



IGP_B_2(1A53)
TRPC_SULSO
[Raw transfer]



ACY_B_14(1VC4)
?
[Raw transfer]
58 HHSearch 91.7538%-110 - C3 -3QJA - TRPC_MYCTU -
45 Fugue 91.6735%-112 - C3 -1PII - ? -
56 HHSearch 90.2939%-101 * C3 *1VC4 - ? -
6 PsiBlast_PDB 90.2939%-105 - C3 -1VC4 - ? -
55 HHSearch 90.2838%-101 - C3 -3TSM - TRPC_BRUA2 -
22 PsiBlast_CBE 88.7339%-100 - C3 -1VC4 3.1 ?
57 HHSearch 88.6834%-103 - C3 -1PII - TRPC_ECOLI -
14 PsiBlast_PDB 88.6336%-107 - C3 -1PII - TRPC_ECOLI -
1 PsiBlast_PDB 87.1639%-104 - C3 -3TSM - TRPC_BRUA2 -
21 PsiBlast_CBE 87.0739%-100 - C3 -3TSM 2.8 TRPC_BRUA2
3 PsiBlast_PDB 84.2042% -92 - C3 -3T55 5.6 TRPC_MYCTU
9 PsiBlast_PDB 83.8038%-107 - C3 -1A53 6.1 TRPC_SULSO
12 PsiBlast_PDB 83.5138%-104 - C3 -1JUL 2.1 TRPC_SULSO
2 PsiBlast_PDB 82.8842% -92 - C3 -3T44 6.3 TRPC_MYCTU
5 PsiBlast_PDB 82.4942% -96 - C3 -4FB7 - TRPC_MYCTU -
54 HHSearch 82.4231% -96 - C3 -1I4N - TRPC_THEMA -
7 PsiBlast_PDB 82.2938%-107 - C3 -1LBF 7.4 TRPC_SULSO
4 PsiBlast_PDB 82.1942% -95 - C3 -3T78 3.1 TRPC_MYCTU
10 PsiBlast_PDB 81.5338%-107 - C3 -1IGS - TRPC_SULSO -
8 PsiBlast_PDB 80.9738%-108 - C3 -1LBL 7.0 TRPC_SULSO
15 PsiBlast_PDB 78.1137%-114 - C3 -1JCM 7.1 TRPC_ECOLI