@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0168: (2015-11-28 )
MEFAVEQAKLAKKNDEIPIGAVIVSGDNIISFAHNISNDPTAHAEMLVIRQACELLSTSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQFCSHVPEVYGGVLETECSFLLKDFFEKLRDSTNYY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_H_4(2B3J)
TADA_STAAM
[Raw transfer]

-

GOL_B_12(2B3J)
TADA_STAAM
[Raw transfer]




GOL_C_14(2B3J)
TADA_STAAM
[Raw transfer]




CHAIN_G_3(2B3J)
TADA_STAAM
[Raw transfer]

-

CHAIN_E_1(2B3J)
TADA_STAAM
[Raw transfer]

-

CHAIN_E_1(2B3J)
TADA_STAAM
[Raw transfer]

-

CHAIN_F_2(2B3J)
TADA_STAAM
[Raw transfer]

-

26 PsiBlast_CBE 87.6442%-130 - C5 -1WWR - TADA_AQUAE -
25 PsiBlast_CBE 87.2142%-139 - C5 -1WWR - TADA_AQUAE -
49 HHSearch 86.7743%-144 - C5 -1WWR - TADA_AQUAE -
21 PsiBlast_CBE 86.6151%-127 - C5 -2A8N - TADA_AGRFC -
3 PsiBlast_PDB 86.3142%-141 - C5 -1WWR - TADA_AQUAE -
27 PsiBlast_CBE 85.9542%-135 - C5 -1WWR - TADA_AQUAE -
47 HHSearch 85.8137%-131 * C5 *2NX8 - TADA_STRP6 -
6 PsiBlast_PDB 84.6234%-133 - C5 -2NX8 - TADA_STRP6 -
24 PsiBlast_CBE 84.4642%-135 - C5 -2B3J 8.8 TADA_STAAM
46 HHSearch 84.2340%-130 - C5 -1Z3A - TADA_ECOLI -
2 PsiBlast_PDB 83.7242%-132 - C5 -2B3J 7.3 TADA_STAAM
23 PsiBlast_CBE 83.4942%-136 - C5 -2B3J 7.7 TADA_STAAM
48 HHSearch 83.1743%-133 - C5 -2B3J 7.5 TADA_STAAM
52 HHSearch 83.0754%-131 - C5 -2A8N - TADA_AGRFC -
4 PsiBlast_PDB 82.9238%-131 - C5 -1Z3A - TADA_ECOLI -
1 PsiBlast_PDB 82.7751%-130 - C5 -2A8N - TADA_AGRFC -
22 PsiBlast_CBE 82.4242%-130 - C5 -2B3J 8.9 TADA_STAAM
5 PsiBlast_PDB 81.7239%-129 - C5 -3OCQ - ? -
28 PsiBlast_CBE 81.4638%-132 - C5 -1Z3A - TADA_ECOLI -
57 HHSearch 77.3830%-124 - C5 -2B3Z - RIBD_BACSU -