@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0176: (2016-03-12 )
MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLFEITSFDQQYGYVGVPTALNKDALQYLCTKFVPIINSIGFNNHDGEFYNINADTLAYFIASSLKAPIYVLSNIAGVLINDVVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKNAIENGCPKVIIASGNKPNIIESIYNNDFVGTTILNS

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(1GSJ)
ARGB_ECOLI
[Raw transfer]




ANP_A_3(1GS5)
ARGB_ECOLI
[Raw transfer]




X2W_B_10(4USJ)
NAGK_ARATH
[Raw transfer]




ANP_A_3(1GS5)
ARGB_ECOLI
[Raw transfer]




ANP_A_3(1GS5)
ARGB_ECOLI
[Raw transfer]




ADP_A_6(4USJ)
NAGK_ARATH
[Raw transfer]




ADP_B_12(2RD5)
NAGK_ARATH
[Raw transfer]




DPO_A_2(3D40)
?
[Raw transfer]




ADP_A_2(1OHA)
ARGB_ECOLI
[Raw transfer]




ADP_A_2(3L86)
ARGB_STRMU
[Raw transfer]




ADP_A_2(3L86)
ARGB_STRMU
[Raw transfer]




X2W_A_3(2X2W)
ARGB_ECOLI
[Raw transfer]




ADP_A_2(1OH9)
ARGB_ECOLI
[Raw transfer]




NLG_B_8(2JJ4)
ARGB_SYNE7
[Raw transfer]




ADP_A_9(2RD5)
NAGK_ARATH
[Raw transfer]




ADP_A_9(2RD5)
NAGK_ARATH
[Raw transfer]




NLG_A_7(2JJ4)
ARGB_SYNE7
[Raw transfer]




ADP_A_3(1OHB)
ARGB_ECOLI
[Raw transfer]




GOL_A_9(3ZZF)
ARG56_YEAST
[Raw transfer]




GLU_A_3(3T7B)
ARGB_YERPE
[Raw transfer]




DTU_A_3(2WXB)
ARGB_ECOLI
[Raw transfer]




NLG_C_19(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_A_15(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_A_15(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_B_17(2BTY)
ARGB_THEMA
[Raw transfer]




29 PsiBlast_CBE 92.1736%-132 - C1 -2BUF - ARGB_PSEAE -
32 PsiBlast_CBE 91.7538%-138 - C1 -2BTY 2.4 ARGB_THEMA
45 HHSearch 90.5334%-135 - C1 -2RD5 5.0 NAGK_ARATH
44 HHSearch 90.4538%-135 * C1 *2BTY 2.3 ARGB_THEMA
2 PsiBlast_PDB 89.5138%-134 - C1 -2BTY 2.3 ARGB_THEMA
43 HHSearch 88.5538%-135 - C1 -2BUF - ARGB_PSEAE -
3 PsiBlast_PDB 88.5532%-132 - C1 -2JJ4 3.3 ARGB_SYNE7
33 PsiBlast_CBE 88.1138%-134 - C1 -2BTY 2.1 ARGB_THEMA
39 PsiBlast_CBE 87.8032%-131 - C1 -2JJ4 3.5 ARGB_SYNE7
34 PsiBlast_CBE 87.0132%-127 - C1 -2V5H - ARGB_SYNE7 -
21 PsiBlast_CBE 86.7836%-127 - C1 -2BUF - ARGB_PSEAE -
35 PsiBlast_CBE 86.3932%-126 - C1 -2V5H - ARGB_SYNE7 -
26 PsiBlast_CBE 86.1136%-130 - C1 -2BUF - ARGB_PSEAE -
38 PsiBlast_CBE 85.9132%-127 - C1 -2V5H - ARGB_SYNE7 -
36 PsiBlast_CBE 85.8732%-128 - C1 -2V5H - ARGB_SYNE7 -
4 PsiBlast_PDB 85.5232%-126 - C1 -2V5H - ARGB_SYNE7 -
1 PsiBlast_PDB 85.5036%-129 - C1 -2BUF - ARGB_PSEAE -
37 PsiBlast_CBE 85.2432%-128 - C1 -2V5H - ARGB_SYNE7 -
30 PsiBlast_CBE 84.5836%-126 - C1 -2BUF - ARGB_PSEAE -
31 PsiBlast_CBE 84.4936%-128 - C1 -2BUF - ARGB_PSEAE -
12 PsiBlast_PDB 83.3330%-137 - C1 -2WXB 2.9 ARGB_ECOLI
5 PsiBlast_PDB 83.1231%-131 - C1 -2RD5 4.8 NAGK_ARATH
41 PsiBlast_CBE 81.9631%-129 - C1 -4USJ 5.5 NAGK_ARATH
64 Fugue 81.7730%-117 - C1 -1GS5 5.2 ARGB_ECOLI
40 PsiBlast_CBE 81.0231%-128 - C1 -2RD5 5.1 NAGK_ARATH
11 PsiBlast_PDB 80.5930%-125 - C1 -1OHB 5.0 ARGB_ECOLI
49 HHSearch 80.5830%-117 - C1 -1GS5 5.2 ARGB_ECOLI
8 PsiBlast_PDB 80.4830%-122 - C1 -1GS5 5.2 ARGB_ECOLI
10 PsiBlast_PDB 79.8030%-126 - C1 -1OHA 6.5 ARGB_ECOLI
9 PsiBlast_PDB 78.9830%-123 - C1 -1OH9 5.7 ARGB_ECOLI
13 PsiBlast_PDB 78.9530%-134 - C1 -2X2W 3.7 ARGB_ECOLI
6 PsiBlast_PDB 78.4831%-125 - C1 -4USJ 6.2 NAGK_ARATH
48 HHSearch 75.5531%-129 - C1 -3L86 5.3 ARGB_STRMU
7 PsiBlast_PDB 65.2630%-128 - C1 -3L86 5.3 ARGB_STRMU