@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1863: (2016-03-29 )
MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASRRGKLTSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQTTADLGGKLNTTDIFEILSQKLNH

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_18(4WUO)
LEU3_THET8
[Raw transfer]



NAD_A_4(4WUO)
LEU3_THET8
[Raw transfer]



NAD_B_3(4XXV)
LEU3_BURTA
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



NAD_X_2(3FMX)
TTUC_PSEPU
[Raw transfer]



NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



GGG_B_7(3TY3)
LYS12_SCHPO
[Raw transfer]



GOL_A_10(4WUO)
LEU3_THET8
[Raw transfer]



GGG_A_3(3TY3)
LYS12_SCHPO
[Raw transfer]



GOL_B_12(3TY4)
LYS12_SCHPO
[Raw transfer]



GOL_B_4(4XXV)
LEU3_BURTA
[Raw transfer]



CIT_E_5(2D1C)
IDH_THET8
[Raw transfer]



CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]



NAD_A_2(1HEX)
LEU3_THET8
[Raw transfer]



GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]



IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]



GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]



IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]



IPM_B_6(1A05)
LEU3_ACIFR
[Raw transfer]



IPM_A_2(3VL3)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL2)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL6)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL7)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL4)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VKZ)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VMJ)
LEU3_SHEON
[Raw transfer]



2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]



2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]



IPM_B_6(3VMK)
?
[Raw transfer]



IPM_A_3(3VMK)
?
[Raw transfer]



IPM_A_2(3VML)
LEU3_SHEON
[Raw transfer]



IPM_A_3(3VMK)
?
[Raw transfer]



NAD_A_2(2ZTW)
LEU3_THET8
[Raw transfer]



ICT_A_7(1LWD)
IDHP_PIG
[Raw transfer]



EOH_B_19(4WUO)
LEU3_THET8
[Raw transfer]
108 HHSearch 96.0552%-100 - C5 -3U1H - ? -
107 HHSearch 95.9851% -94 - C5 -1VLC - LEU3_THEMA -
23 PsiBlast_CBE 95.2150% -90 - C5 -1V5B - LEU3_BACCO -
123 Fugue 94.8851% -95 - C5 -2AYQ - LEU3_BACCO -
41 PsiBlast_CBE 94.5549% -91 - C5 -4WUO 7.9 LEU3_THET8
103 HHSearch 94.5447% -94 - C5 -2Y3Z 2.8 LEU3_THET8
5 PsiBlast_PDB 94.5249% -92 - C5 -1VLC - LEU3_THEMA -
28 PsiBlast_CBE 94.2649% -90 - C5 -4F7I - LEU3_THET8 -
1 PsiBlast_PDB 94.2454%-100 - C5 -3U1H - ? -
60 PsiBlast_CBE 94.0846% -98 - C5 -3UDU - LEU3_CAMJE -
63 PsiBlast_CBE 94.0446%-100 - C5 -3UDU - LEU3_CAMJE -
55 PsiBlast_CBE 93.9748% -95 - C5 -4XXV 8.0 LEU3_BURTA
37 PsiBlast_CBE 93.9549% -92 - C5 -3R8W - LEU32_ARATH -
62 PsiBlast_CBE 93.9246% -99 - C5 -3UDU - LEU3_CAMJE -
2 PsiBlast_PDB 93.8051% -90 - C5 -2AYQ - LEU3_BACCO -
64 PsiBlast_CBE 93.7146% -98 - C5 -3UDU - LEU3_CAMJE -
109 HHSearch 93.6746% -90 * C5 *3R8W - LEU32_ARATH -
3 PsiBlast_PDB 93.6251% -87 - C5 -1V53 - LEU3_BACCO -
40 PsiBlast_CBE 93.5649% -90 - C5 -4WUO 8.1 LEU3_THET8
26 PsiBlast_CBE 93.5446% -94 - C5 -1CNZ - LEU3_SALTY -
105 HHSearch 93.2845% -94 - C5 -3VMK 3.3 ?
54 PsiBlast_CBE 93.1046%-101 - C5 -3VML 3.3 LEU3_SHEON
13 PsiBlast_PDB 93.0549% -93 - C5 -2Y3Z 2.8 LEU3_THET8
52 PsiBlast_CBE 92.9946%-100 - C5 -3VMK 3.0 ?
48 PsiBlast_CBE 92.6746% -98 - C5 -3VL2 3.3 LEU3_SHEON
44 PsiBlast_CBE 92.2046%-100 - C5 -3VL7 3.1 LEU3_SHEON
53 PsiBlast_CBE 91.9246% -99 - C5 -3VMK 3.3 ?
49 PsiBlast_CBE 91.8146% -99 - C5 -3VKZ 3.3 LEU3_SHEON
104 HHSearch 91.7443% -92 - C5 -1A05 3.7 LEU3_ACIFR
43 PsiBlast_CBE 91.6646%-100 - C5 -3VMJ 3.2 LEU3_SHEON
39 PsiBlast_CBE 91.5049% -90 - C5 -1HEX 7.1 LEU3_THET8
38 PsiBlast_CBE 91.4749% -88 - C5 -2ZTW 4.6 LEU3_THET8
47 PsiBlast_CBE 91.4646% -95 - C5 -3VL3 3.3 LEU3_SHEON
45 PsiBlast_CBE 91.2446% -98 - C5 -3VL6 3.3 LEU3_SHEON
46 PsiBlast_CBE 91.0946% -97 - C5 -3VL4 3.5 LEU3_SHEON
51 PsiBlast_CBE 90.1045% -93 - C5 -1A05 3.7 LEU3_ACIFR
50 PsiBlast_CBE 89.5345% -91 - C5 -1A05 3.7 LEU3_ACIFR
66 PsiBlast_CBE 82.4535% -89 - C5 -3FMX 6.5 TTUC_PSEPU
113 HHSearch 81.0233% -94 - C5 -3TY4 3.0 LYS12_SCHPO
115 HHSearch 78.2433% -84 - C5 -2D1C 6.7 IDH_THET8
84 PsiBlast_CBE 77.0332% -86 - C5 -3TY4 3.0 LYS12_SCHPO
124 Fugue 76.9032% -79 - C5 -2D1C 6.3 IDH_THET8
86 PsiBlast_CBE 76.4632% -86 - C5 -3TY3 3.0 LYS12_SCHPO
83 PsiBlast_CBE 75.9332% -89 - C5 -3TY4 3.5 LYS12_SCHPO
85 PsiBlast_CBE 75.5132% -87 - C5 -3TY3 2.2 LYS12_SCHPO
87 PsiBlast_CBE 73.8932% -69 - C5 -2D1C 6.6 IDH_THET8
88 PsiBlast_CBE 72.5232% -69 - C5 -2D1C 6.3 IDH_THET8