@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2204: (2016-04-02 )
MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VO3_A_2(1E59)
GPMA_ECOLI
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



DG2_A_3(3FDZ)
GPMA_BURP1
[Raw transfer]



3PG_B_9(3GP5)
GPMA_BURP1
[Raw transfer]



DG2_B_3(2H4Z)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(3GP5)
GPMA_BURP1
[Raw transfer]



BHC_H_8(1BQ4)
PMG1_YEAST
[Raw transfer]



IHP_J_10(1BQ3)
PMG1_YEAST
[Raw transfer]



3PG_B_4(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(2F90)
PMGE_HUMAN
[Raw transfer]



IHP_I_9(1BQ3)
PMG1_YEAST
[Raw transfer]



3PG_A_3(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_B_6(2F90)
PMGE_HUMAN
[Raw transfer]



CIT_A_4(1YFK)
PGAM1_HUMAN
[Raw transfer]



CIT_B_5(1YFK)
PGAM1_HUMAN
[Raw transfer]



GOL_A_4(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_B_10(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_D_7(1RII)
GPMA_MYCTU
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]
1 PsiBlast_PDB 94.5154% -77 - C1 -4EMB 3.6 GPMA_BORBU
117 HHSearch 92.5249% -75 - C1 -3D8H - ? -
4 PsiBlast_PDB 92.3250% -75 - C1 -1BQ4 - PMG1_YEAST -
17 PsiBlast_PDB 92.0849% -76 - C1 -3D8H - ? -
45 PsiBlast_CBE 91.9348% -72 - C1 -4ODI - ? -
114 HHSearch 91.7149% 0 - C- -3GP3 - GPMA_BURP1 -
115 HHSearch 91.4049% -77 - C1 -3KKK - ? -
35 PsiBlast_CBE 91.4049% -78 - C1 -1XQ9 - ? -
31 PsiBlast_CBE 91.2850% -73 - C1 -1BQ3 - PMG1_YEAST -
12 PsiBlast_PDB 91.2749% -77 - C1 -3GW8 3.8 GPMA_BURP1
5 PsiBlast_PDB 91.2450% -71 - C1 -5PGM - PMG1_YEAST -
28 PsiBlast_CBE 91.2350% -76 - C1 -1BQ4 - PMG1_YEAST -
27 PsiBlast_CBE 91.1750% -70 - C1 -5PGM - PMG1_YEAST -
22 PsiBlast_CBE 91.0750% -71 - C1 -5PGM - PMG1_YEAST -
24 PsiBlast_CBE 91.0450% -71 - C1 -5PGM - PMG1_YEAST -
16 PsiBlast_PDB 91.0448% -72 - C1 -4ODI - ? -
10 PsiBlast_PDB 90.8849% 0 - C- -3GP3 - GPMA_BURP1 -
2 PsiBlast_PDB 90.8650% -74 - C1 -4PGM - PMG1_YEAST -
43 PsiBlast_CBE 90.5848% -74 - C1 -4ODI - ? -
44 PsiBlast_CBE 90.5648% -73 - C1 -4ODI - ? -
37 PsiBlast_CBE 89.7849% -78 - C1 -3GP5 4.8 GPMA_BURP1
3 PsiBlast_PDB 89.5550% -70 - C1 -1BQ3 2.8 PMG1_YEAST
30 PsiBlast_CBE 89.2850% -70 - C1 -1BQ4 4.4 PMG1_YEAST
34 PsiBlast_CBE 89.0150% -65 - C1 -1QHF 2.7 PMG1_YEAST
6 PsiBlast_PDB 88.9250% -67 - C1 -1QHF 3.3 PMG1_YEAST
36 PsiBlast_CBE 88.7249% -78 - C1 -3GW8 2.6 GPMA_BURP1
33 PsiBlast_CBE 88.2450% -68 - C1 -1BQ3 3.4 PMG1_YEAST
105 Fugue 88.2349% -68 - C1 -1QHF 3.3 PMG1_YEAST
15 PsiBlast_PDB 88.1147% -71 - C1 -1E59 5.4 GPMA_ECOLI
47 PsiBlast_CBE 88.0546% -78 - C1 -2H52 3.9 PMGE_HUMAN
120 HHSearch 87.7849% -66 - C1 -1QHF 3.3 PMG1_YEAST
76 PsiBlast_CBE 87.7346% -70 - C1 -1YFK 3.2 PGAM1_HUMAN
54 PsiBlast_CBE 87.7146% -78 - C1 -2F90 5.3 PMGE_HUMAN
11 PsiBlast_PDB 87.6549% -76 - C1 -3GP5 4.4 GPMA_BURP1
48 PsiBlast_CBE 87.5946% -79 - C1 -2H52 4.2 PMGE_HUMAN
75 PsiBlast_CBE 87.5546% -69 - C1 -1YFK 2.3 PGAM1_HUMAN
49 PsiBlast_CBE 87.5446% -75 - C1 -2H4Z 5.7 PMGE_HUMAN
9 PsiBlast_PDB 87.2349% -74 - C1 -3FDZ 5.5 GPMA_BURP1
51 PsiBlast_CBE 87.2146% -78 - C1 -2H4X 4.0 PMGE_HUMAN
56 PsiBlast_CBE 86.9146% -78 - C1 -2A9J 4.2 PMGE_HUMAN
53 PsiBlast_CBE 86.8746% -78 - C1 -2F90 4.0 PMGE_HUMAN
52 PsiBlast_CBE 86.8646% -75 - C1 -2H4X 3.9 PMGE_HUMAN
118 HHSearch 86.8248% -68 - C1 -1RII 2.4 GPMA_MYCTU
55 PsiBlast_CBE 86.6146% -74 - C1 -2A9J 4.1 PMGE_HUMAN
50 PsiBlast_CBE 86.5846% -78 - C1 -2H4Z 5.3 PMGE_HUMAN
57 PsiBlast_CBE 84.6849% -60 - C1 -1RII 2.4 GPMA_MYCTU
60 PsiBlast_CBE 82.2249% -62 - C1 -1RII 2.4 GPMA_MYCTU
59 PsiBlast_CBE 81.9049% -60 - C1 -1RII 2.2 GPMA_MYCTU