@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0844: (2016-03-19 )
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVVGATKQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEVIAEA

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FLC_D_17(3MQW)
?
[Raw transfer]



FLC_E_21(3MQW)
?
[Raw transfer]



FLC_A_7(3MQW)
?
[Raw transfer]



FLC_B_9(3MQW)
?
[Raw transfer]



FLC_C_13(3MQW)
?
[Raw transfer]



BGC_B_5(3K0T)
?
[Raw transfer]



BGC_B_5(3K0T)
?
[Raw transfer]



BEZ_I_21(1ONI)
UK114_HUMAN
[Raw transfer]



BEZ_F_18(1ONI)
UK114_HUMAN
[Raw transfer]



BEZ_A_10(1ONI)
UK114_HUMAN
[Raw transfer]



BEZ_D_15(1ONI)
UK114_HUMAN
[Raw transfer]



BEZ_E_17(1ONI)
UK114_HUMAN
[Raw transfer]



BEZ_G_19(1ONI)
UK114_HUMAN
[Raw transfer]



GOL_C_15(3VCZ)
?
[Raw transfer]



BEZ_C_14(1ONI)
UK114_HUMAN
[Raw transfer]



BEZ_H_20(1ONI)
UK114_HUMAN
[Raw transfer]



GOL_A_6(3VCZ)
?
[Raw transfer]



GOL_A_6(3VCZ)
?
[Raw transfer]



BEZ_B_13(1ONI)
UK114_HUMAN
[Raw transfer]
86 HHSearch 93.9848% -76 - C3 -3VCZ 2.8 ?
9 PsiBlast_PDB 93.3948% -85 - C3 -3VCZ 2.8 ?
33 PsiBlast_CBE 92.5048% -86 - C3 -3VCZ 2.0 ?
34 PsiBlast_CBE 92.3448% -82 - C3 -3VCZ - ? -
75 HHSearch 91.8048% -71 - C3 -1QU9 - RIDA_ECOLI -
60 Fugue 91.7948% -70 - C3 -1QU9 - RIDA_ECOLI -
61 Fugue 91.5848% -70 - C3 -1QU9 - RIDA_ECOLI -
2 PsiBlast_PDB 91.5050% -86 - C3 -1NQ3 - UK114_CAPHI -
84 HHSearch 91.3249% -83 - C3 -2DYY - Y854_PYRHO -
5 PsiBlast_PDB 91.3250% -87 - C3 -2DYY - Y854_PYRHO -
73 HHSearch 91.0852% -82 - C3 -1XRG - ? -
82 HHSearch 90.6850% -86 - C3 -3L7Q - ? -
30 PsiBlast_CBE 90.6552% -93 - C3 -1XRG - ? -
29 PsiBlast_CBE 90.5852% -90 - C3 -1XRG - ? -
22 PsiBlast_CBE 90.5846% -88 - C3 -1ONI 3.9 UK114_HUMAN
4 PsiBlast_PDB 90.5652% -87 - C3 -3L7Q - ? -
27 PsiBlast_CBE 90.3846% -95 - C3 -1ONI 4.0 UK114_HUMAN
23 PsiBlast_CBE 90.0446% -93 - C3 -1ONI 2.8 UK114_HUMAN
24 PsiBlast_CBE 90.0346% -88 - C3 -1ONI 3.0 UK114_HUMAN
25 PsiBlast_CBE 89.9746% -90 - C3 -1ONI 4.0 UK114_HUMAN
3 PsiBlast_PDB 89.9546% -92 - C3 -1ONI 2.8 UK114_HUMAN
26 PsiBlast_CBE 89.5046% -88 - C3 -1ONI 3.0 UK114_HUMAN
21 PsiBlast_CBE 89.0346% -93 - C3 -1ONI 2.8 UK114_HUMAN
28 PsiBlast_CBE 88.9946% -96 - C3 -1ONI 2.9 UK114_HUMAN
42 PsiBlast_CBE 86.2042% -88 - C3 -3MQW 2.4 ?
81 HHSearch 85.8541% -74 - C3 -3K0T 2.7 ?
39 PsiBlast_CBE 85.4242% -85 - C3 -3MQW 2.5 ?
17 PsiBlast_PDB 85.2242% -77 - C3 -3K0T 2.7 ?
40 PsiBlast_CBE 85.1442% -85 - C3 -3MQW 2.5 ?
37 PsiBlast_CBE 85.0542% -86 - C3 -3MQW 2.4 ?
41 PsiBlast_CBE 84.7942% -86 - C3 -3MQW 2.5 ?