@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2547: (2016-04-04 )
VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_3(3ING)
?
[Raw transfer]



GOL_B_15(2EJW)
?
[Raw transfer]



HSE_A_4(4XB2)
?
[Raw transfer]



HSE_B_7(4XB2)
?
[Raw transfer]



MPD_B_9(4XB1)
?
[Raw transfer]



MPD_A_5(4XB1)
?
[Raw transfer]



PEG_B_21(4PG8)
?
[Raw transfer]



PEG_A_14(4PG4)
?
[Raw transfer]



DMS_B_26(4PG4)
?
[Raw transfer]
28 HHSearch 98.2240% -97 - C4 -3MTJ - ? -
51 Fugue 94.0341% -96 - C4 -4PG7 - ? -
3 PsiBlast_PDB 88.9440% -95 - C4 -3MTJ - ? -
21 PsiBlast_CBE 88.1450%-104 - C4 -4PG8 2.6 ?
22 PsiBlast_CBE 87.6350%-103 - C4 -4PG4 3.3 ?
2 PsiBlast_PDB 85.9750%-101 - C4 -4PG6 - ? -
1 PsiBlast_PDB 85.5950% -98 - C4 -4PG4 3.0 ?
50 Fugue 81.1833% -83 - C4 -2EJW - ? -
33 HHSearch 80.7336% -91 - C4 -2EJW - ? -
5 PsiBlast_PDB 77.4435%-101 - C4 -2EJW - ? -
25 PsiBlast_CBE 77.2235%-102 - C4 -2EJW 3.1 ?
24 PsiBlast_CBE 76.7835%-103 - C4 -2EJW - ? -
23 PsiBlast_CBE 76.4435% -95 - C4 -2EJW - ? -
29 HHSearch 76.2135% -95 * C4 *3DO5 - ? -
4 PsiBlast_PDB 75.9736% -96 - C4 -3DO5 - ? -
26 PsiBlast_CBE 75.8531% -89 - C4 -4XB1 3.8 ?
27 PsiBlast_CBE 75.2631% -90 - C4 -4XB2 3.1 ?
7 PsiBlast_PDB 75.0831% -88 - C4 -4XB2 3.3 ?
6 PsiBlast_PDB 74.3731% -89 - C4 -4XB1 2.7 ?
30 HHSearch 72.1724% -80 - C4 -1EBF - DHOM_YEAST -