@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13600: (2016-06-21 )
MTTRKPFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQNKNAGESSLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_9(2FEA)
MTNX_BACSU
[Raw transfer]
11 HHSearch 83.35100%-176 - C1 -2FEA 3.2 MTNX_BACSU
1 PsiBlast_PDB 82.6597%-176 - C1 -2FEA - MTNX_BACSU -
32 Fugue 54.0915%-154 - C1 -1RKU - THRH_PSEAE -
35 Fugue 53.8317%-135 - C1 -3P96 - SERB_MYCA1 -
21 HHSearch 51.5513%-154 - C1 -1RKU - THRH_PSEAE -
27 HHSearch 50.0617%-136 * C1 *4EZE - ? -
15 HHSearch 48.4521%-141 - C1 -1NNL - SERB_HUMAN -
33 Fugue 47.8719%-112 - C1 -1F5S - SERB_METJA -
3 PsiBlast_PDB 47.5222%-114 - C1 -1L8L - SERB_HUMAN -
4 PsiBlast_PDB 46.6322%-121 - C1 -1L8O - SERB_HUMAN -
16 HHSearch 45.5819%-130 - C1 -4AP9 - ? -
2 PsiBlast_PDB 45.2922%-117 - C1 -1NNL - SERB_HUMAN -
18 HHSearch 43.9314%-137 - C1 -3M1Y - ? -
12 HHSearch 43.5713%-134 - C1 -3N28 - SERB_VIBCH -
13 HHSearch 42.9419%-125 - C1 -1L7M - SERB_METJA -
36 Fugue 40.9915%-106 - C1 -2HCF - ? -
38 Fugue 37.1411%-117 - C1 -1FEZ - PHNX_BACCE -
40 Fugue 36.0312%-129 - C1 -1U7P - MGDP1_MOUSE -
30 HHSearch 35.8014%-133 - C1 -3M9L - ? -
37 Fugue 34.4115%-121 - C1 -2GMW - GMHBB_ECOLI -