@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34240: (2016-07-27 )
MKNVAIVGDGGHGKVIRELINARSDTRLAAVLDDKFKTFEGGKEWYTGPPKAVTELRRLIPDVLFLIAVGNNSVRKQLAERLGLGKDDFITLIHPSAIVSKSAVIGEGTVIMAGAIIQADARIGAHCIINTGAVAEHDNQISDYVHLSPRATLSGAVSVQEGAHVGTGASVIPQIIIGAWSIVGAGSAVIRSIPDRVTAAGAPARIISSIQTSNKG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

JBT_A_2(4EA9)
?
[Raw transfer]




JBT_A_2(4EA9)
?
[Raw transfer]




COA_A_3(4EAB)
?
[Raw transfer]




COA_A_3(4EAB)
?
[Raw transfer]




COA_A_2(4EA7)
?
[Raw transfer]




COA_A_2(4EA8)
?
[Raw transfer]




COA_A_3(4EAA)
?
[Raw transfer]




ACO_B_6(4M99)
?
[Raw transfer]




ACO_C_7(4M99)
?
[Raw transfer]




UD4_A_2(3BSS)
PGLD_CAMJE
[Raw transfer]




CIT_A_2(3BSW)
PGLD_CAMJE
[Raw transfer]




6 PsiBlast_PDB 84.0642%-142 - C4 -4EAA 4.1 ?
7 PsiBlast_PDB 83.0742%-144 - C4 -4EAB 4.1 ?
1 PsiBlast_PDB 81.9042%-149 * C4 *4EA7 3.2 ?
3 PsiBlast_PDB 81.7042%-145 - C4 -4EA9 6.8 ?
2 PsiBlast_PDB 81.4142%-147 - C4 -4EA8 4.0 ?
88 HHSearch 78.6541% -70 - C4 -4EA9 9.5 ?
107 Fugue 73.3140% -9 - C4 -4EAB 3.1 ?
87 HHSearch 71.2337% -45 - C- -4M98 - ? -
108 Fugue 71.0828% -89 - C4 -3BFP - PGLD_CAMJE -
13 PsiBlast_PDB 69.6127% -94 - C4 -3BSY - PGLD_CAMJE -
4 PsiBlast_PDB 69.1537% -25 - C4 -4M99 4.4 ?
9 PsiBlast_PDB 69.0427%-100 - C4 -2VHE - PGLD_CAMJE -
90 HHSearch 68.8930% -77 - C4 -3BFP - PGLD_CAMJE -
21 PsiBlast_CBE 68.8937% -26 - C4 -4M99 4.4 ?
11 PsiBlast_PDB 68.5227% -92 - C4 -3BSS 5.1 PGLD_CAMJE
5 PsiBlast_PDB 67.1637% -28 - C- -4M98 - ? -
8 PsiBlast_PDB 66.0827% -98 - C4 -3BFP - PGLD_CAMJE -
10 PsiBlast_PDB 65.4927% -97 - C4 -2NPO - PGLD_CAMJE -
12 PsiBlast_PDB 65.1727% -95 - C4 -3BSW 2.8 PGLD_CAMJE
89 HHSearch 63.5627% -54 - C- -4M9C - ? -