@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0927c: (2016-04-27 )
MILDMFRLDDKVAVITGGGRGLGAAIALAFAQAGADVLIASRTSSELDAVAEQIRAAGRRAHTVAADLAHPEVTAQLAGQAVGAFGKLDIVVNNVGGTMPNTLLSTSTKDLADAFAFNVGTAHALTVAAVPLMLEHSGGGSVINISSTMGRLAARGFAAYGTAKAALAHYTRLAALDLCPRVRVNAIAPGSILTSALEVVAANDELRAPMEQATPLRRLGDPVDIAAAAVYLASPAGSFLTGKTLEVDGGLTFPNLDLPIPDL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(1AHH)
HDHA_ECOLI
[Raw transfer]



NAD_B_7(1AHH)
HDHA_ECOLI
[Raw transfer]



GOL_B_14(3PK0)
?
[Raw transfer]



GOL_A_9(3PK0)
?
[Raw transfer]



GOL_C_18(3PK0)
?
[Raw transfer]



GOL_D_22(3PK0)
?
[Raw transfer]



EDO_C_26(3RIH)
?
[Raw transfer]



PG5_D_(3RIH)
?
[Raw transfer]



EDO_C_9(4BMN)
?
[Raw transfer]



PG5_C_21(3RIH)
?
[Raw transfer]



PG5_A_6(3RIH)
?
[Raw transfer]



PG5_B_14(3RIH)
?
[Raw transfer]



EDO_B_7(4BMN)
?
[Raw transfer]
5 PsiBlast_PDB 86.2740% -99 - C1 -3GAF - ? -
3 PsiBlast_PDB 84.9839%-101 - C1 -1FMC - HDHA_ECOLI -
119 HHSearch 84.4840%-102 - C1 -3GAF - ? -
1 PsiBlast_PDB 84.4539%-102 - C1 -1AHI - HDHA_ECOLI -
21 PsiBlast_CBE 83.6039%-103 - C1 -1FMC - HDHA_ECOLI -
23 PsiBlast_CBE 83.1439%-102 - C1 -1AHH 8.3 HDHA_ECOLI
22 PsiBlast_CBE 82.9139%-102 - C1 -1AHI - HDHA_ECOLI -
61 PsiBlast_CBE 82.6737% -95 - C1 -3PK0 2.7 ?
58 PsiBlast_CBE 82.0537% -98 - C1 -3PK0 2.7 ?
2 PsiBlast_PDB 81.8939%-101 - C1 -1AHH 8.2 HDHA_ECOLI
60 PsiBlast_CBE 81.6337% -96 - C1 -3PK0 2.8 ?
42 PsiBlast_CBE 80.9238% -97 - C1 -3RIH 3.5 ?
14 PsiBlast_PDB 80.5333% -94 - C1 -2AE2 - TRN2_DATST -
40 PsiBlast_CBE 80.4433% -96 - C1 -2AE2 - TRN2_DATST -
41 PsiBlast_CBE 80.0738% -97 - C1 -3RIH 2.0 ?
96 PsiBlast_CBE 80.0437% -94 - C1 -4BMN 3.2 ?
39 PsiBlast_CBE 79.7033% -97 - C1 -1IPE - TRN2_DATST -
59 PsiBlast_CBE 79.6737% -96 - C1 -3PK0 2.7 ?
91 PsiBlast_CBE 79.3337% -90 - C1 -4BMS - ? -
7 PsiBlast_PDB 79.2734% -97 - C1 -1RWB - DHG_BACME -
16 PsiBlast_PDB 78.7638% -97 - C1 -3RIH 1.9 ?
43 PsiBlast_CBE 78.0038% -97 - C1 -3RIH 1.8 ?
97 PsiBlast_CBE 73.4937% -94 - C1 -4BMN 3.0 ?