@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1245c: (2016-04-29 )
MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDVDTDGLADTEHRLKAISTPVKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGDGHVINISSVFGLFSAPGQAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNATAAEGLDQAELAETFDKRVAHLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_G_7(1NFF)
HSD_MYCTU
[Raw transfer]



NAI_K_11(1NFQ)
HSD_MYCTU
[Raw transfer]



NAI_G_7(1NFQ)
HSD_MYCTU
[Raw transfer]



NAD_E_5(1NFF)
HSD_MYCTU
[Raw transfer]



NAI_C_8(4NBU)
?
[Raw transfer]



NAI_A_5(4NBU)
?
[Raw transfer]



NAI_D_9(4NBU)
?
[Raw transfer]



NAP_D_8(3P19)
?
[Raw transfer]



NAI_B_6(4NBU)
?
[Raw transfer]



NAP_A_5(3P19)
?
[Raw transfer]



NAI_E_5(1NFQ)
HSD_MYCTU
[Raw transfer]



NAI_I_9(1NFQ)
HSD_MYCTU
[Raw transfer]



NAP_C_7(4DMM)
?
[Raw transfer]



NAP_B_6(4DMM)
?
[Raw transfer]



NAP_D_8(4DMM)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



THJ_A_4(3GED)
?
[Raw transfer]
66 PsiBlast_CBE 84.5531% -62 - C2 -4YAI - ? -
121 HHSearch 84.1730% -76 - C2 -1YB1 - DHB11_HUMAN -
65 PsiBlast_CBE 83.9031% -62 - C2 -4YAI - ? -
23 PsiBlast_CBE 83.5734% -76 - C2 -4NBT - ? -
68 PsiBlast_CBE 83.2831% -62 - C2 -4YAG - ? -
67 PsiBlast_CBE 82.8531% -61 - C2 -4YAG - ? -
11 PsiBlast_PDB 81.2634% -73 - C2 -4NBT - ? -
24 PsiBlast_CBE 79.2434% -75 - C2 -4NBT - ? -
25 PsiBlast_CBE 78.8334% -70 - C2 -4NBT - ? -
2 PsiBlast_PDB 77.8833% -72 - C2 -4YA6 - ? -
3 PsiBlast_PDB 77.7533% -70 - C2 -4YAC - ? -
35 PsiBlast_CBE 75.1833% -66 - C2 -2JAP - ? -
36 PsiBlast_CBE 75.1633% -64 - C2 -2JAP - ? -
37 PsiBlast_CBE 74.8333% -64 - C2 -2JAP - ? -
4 PsiBlast_PDB 74.8133% -79 - C2 -3P19 7.9 ?
54 PsiBlast_CBE 74.5333% -79 - C2 -1NFF 7.4 HSD_MYCTU
17 PsiBlast_PDB 74.3033% -63 - C2 -2JAP - ? -
83 PsiBlast_CBE 74.1535% -67 - C2 -3UVE - ? -
82 PsiBlast_CBE 74.1435% -68 - C2 -3UVE - ? -
22 PsiBlast_CBE 74.0533% -80 - C2 -3P19 8.0 ?
52 PsiBlast_CBE 73.3833% -76 - C2 -1NFQ 6.7 HSD_MYCTU
55 PsiBlast_CBE 72.9333% -78 - C2 -1NFF 7.0 HSD_MYCTU
51 PsiBlast_CBE 71.8233% -74 - C2 -1NFQ 6.5 HSD_MYCTU
43 PsiBlast_CBE 71.7035% -70 - C2 -4NBU 11.0 ?
50 PsiBlast_CBE 71.3833% -74 - C2 -1NFQ 6.6 HSD_MYCTU
53 PsiBlast_CBE 71.2533% -74 - C2 -1NFQ 6.3 HSD_MYCTU
19 PsiBlast_PDB 68.9035% -70 - C2 -4NBU 10.6 ?
42 PsiBlast_CBE 67.8635% -69 - C2 -4NBU 11.3 ?
64 PsiBlast_CBE 67.8437% -71 - C2 -3RRO 2.6 FABG_VIBCH
41 PsiBlast_CBE 67.5735% -71 - C2 -4NBU 10.7 ?
63 PsiBlast_CBE 67.4937% -72 - C2 -3RRO 2.6 FABG_VIBCH
87 PsiBlast_CBE 57.0235% -62 * C2 *4DMM 10.0 ?
89 PsiBlast_CBE 56.3635% -59 - C2 -4DMM 7.8 ?
88 PsiBlast_CBE 53.6935% -57 - C2 -4DMM 7.7 ?