@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1399c: (2016-05-01 )
MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPPELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DEP_B_8(3AIL)
?
[Raw transfer]




DEP_D_15(3AIL)
?
[Raw transfer]




DEP_A_5(3AIL)
?
[Raw transfer]




DEP_C_11(3AIL)
?
[Raw transfer]




S2T_A_2(4OB6)
?
[Raw transfer]




EPE_A_2(1EVQ)
?
[Raw transfer]




MRD_C_15(3AIN)
?
[Raw transfer]




DEP_A_2(2O7V)
CXE1_ACTER
[Raw transfer]




MRD_C_16(3AIO)
?
[Raw transfer]




MRD_C_13(3AIK)
?
[Raw transfer]




PMS_A_3(3H18)
?
[Raw transfer]




MPD_A_5(3AIK)
?
[Raw transfer]




4PA_A_2(2O7R)
CXE1_ACTER
[Raw transfer]




MPD_A_5(3AIO)
?
[Raw transfer]




MPD_A_5(3AIN)
?
[Raw transfer]




MPD_A_5(3AIM)
?
[Raw transfer]




PMS_A_2(3H18)
?
[Raw transfer]




PMS_A_2(3H17)
?
[Raw transfer]




MPD_B_11(3AIK)
?
[Raw transfer]




MRD_D_17(3AIM)
?
[Raw transfer]




MRD_C_13(3AIM)
?
[Raw transfer]




MRD_D_21(3AIO)
?
[Raw transfer]




MPD_A_2(4OU5)
?
[Raw transfer]




MPD_B_9(3AIK)
?
[Raw transfer]




MRD_D_18(3AIN)
?
[Raw transfer]




MPD_B_12(3AIN)
?
[Raw transfer]




MRD_D_17(3AIK)
?
[Raw transfer]




MPD_A_2(4OB8)
?
[Raw transfer]




MPD_A_2(4OB7)
?
[Raw transfer]




MPD_A_2(4OB7)
?
[Raw transfer]




MRD_B_9(3AIO)
?
[Raw transfer]




MRD_B_10(3AIM)
?
[Raw transfer]




1 PsiBlast_PDB 93.4843%-106 * C1 *1QZ3 - ? -
4 PsiBlast_PDB 92.3943%-107 - C1 -1EVQ 3.0 ?
2 PsiBlast_PDB 89.6943%-103 - C1 -1U4N - ? -
3 PsiBlast_PDB 89.2042%-104 - C1 -2HM7 - ? -
152 HHSearch 82.0646%-101 - C1 -2HM7 - ? -
36 PsiBlast_CBE 81.8438%-104 - C1 -1JJI - ? -
38 PsiBlast_CBE 81.8138%-100 - C1 -1JJI - ? -
10 PsiBlast_PDB 80.5738%-100 - C1 -1JJI - ? -
37 PsiBlast_CBE 80.5538%-101 - C1 -1JJI - ? -
24 PsiBlast_CBE 79.7438% -87 - C1 -3AIM 2.9 ?
29 PsiBlast_CBE 79.6538% -90 - C1 -3AIL 2.6 ?
5 PsiBlast_PDB 79.6538% -92 - C1 -3AIO 2.3 ?
34 PsiBlast_CBE 79.6138% -90 - C1 -3AIN 2.3 ?
27 PsiBlast_CBE 79.1038% -89 - C1 -3AIL 3.5 ?
138 HHSearch 78.8739% -96 - C1 -4V2I - ? -
22 PsiBlast_CBE 78.7838% -89 - C1 -3AIO 2.3 ?
30 PsiBlast_CBE 78.7638% -90 - C1 -3AIK 3.0 ?
32 PsiBlast_CBE 78.7438% -88 - C1 -3AIK 2.7 ?
16 PsiBlast_PDB 78.7038% -96 - C1 -4OU5 2.8 ?
28 PsiBlast_CBE 78.6838% -91 - C1 -3AIL 2.8 ?
33 PsiBlast_CBE 78.5738% -90 - C1 -3AIN 3.0 ?
9 PsiBlast_PDB 78.3438% -92 - C1 -3AIN 2.0 ?
25 PsiBlast_CBE 78.1038% -90 - C1 -3AIM 2.6 ?
26 PsiBlast_CBE 77.9538% -90 - C1 -3AIM 2.8 ?
7 PsiBlast_PDB 77.8238% -90 - C1 -3AIK 3.0 ?
21 PsiBlast_CBE 77.8138% -91 - C1 -3AIO 3.1 ?
31 PsiBlast_CBE 77.6838% -91 - C1 -3AIK 2.3 ?
135 HHSearch 77.6739% -98 - C1 -4OB7 3.7 ?
8 PsiBlast_PDB 77.2438% -88 - C1 -3AIL 2.8 ?
35 PsiBlast_CBE 76.6538% -88 - C1 -3AIN 2.8 ?
23 PsiBlast_CBE 76.4138% -88 - C1 -3AIO 2.8 ?
6 PsiBlast_PDB 75.0538% -89 - C1 -3AIM 2.6 ?
14 PsiBlast_PDB 71.5439% -95 - C1 -4OB7 2.6 ?
17 PsiBlast_PDB 69.9039% -90 - C1 -4OB6 4.2 ?
15 PsiBlast_PDB 69.2839% -93 - C1 -4OB8 2.5 ?
61 PsiBlast_CBE 48.3331% -78 - C1 -3H17 3.2 ?
60 PsiBlast_CBE 47.9631% -80 - C1 -3H18 3.4 ?
78 PsiBlast_CBE 32.9238%-101 - C1 -2O7R 3.2 CXE1_ACTER
77 PsiBlast_CBE 30.5538% -99 - C1 -2O7V 3.9 CXE1_ACTER