@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1400c: (2016-05-01 )
MPSLDNTADEKPAIDPILLKVLDAVPFRLSIDDGIEAVRQRLRDLPRQPVHPELRVVDLAIDGPAGPIGTRIYWPPTCPDQAEAPVVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAFSRWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DEP_B_8(3AIL)
?
[Raw transfer]




DEP_A_5(3AIL)
?
[Raw transfer]




S2T_A_2(4OB6)
?
[Raw transfer]




DEP_C_11(3AIL)
?
[Raw transfer]




DEP_D_15(3AIL)
?
[Raw transfer]




EPE_A_2(1EVQ)
?
[Raw transfer]




PMS_A_2(3H17)
?
[Raw transfer]




PMS_A_2(3H18)
?
[Raw transfer]




DEP_A_2(2O7V)
CXE1_ACTER
[Raw transfer]




MRD_C_15(3AIN)
?
[Raw transfer]




4PA_A_2(2O7R)
CXE1_ACTER
[Raw transfer]




MRD_D_18(3AIN)
?
[Raw transfer]




MPD_A_5(3AIN)
?
[Raw transfer]




MRD_C_16(3AIO)
?
[Raw transfer]




MRD_C_13(3AIK)
?
[Raw transfer]




BME_D_19(3DNM)
?
[Raw transfer]




MRD_D_17(3AIK)
?
[Raw transfer]




MPD_A_5(3AIK)
?
[Raw transfer]




MRD_D_17(3AIM)
?
[Raw transfer]




PMS_A_3(3H18)
?
[Raw transfer]




MRD_D_21(3AIO)
?
[Raw transfer]




MRD_C_13(3AIM)
?
[Raw transfer]




MPD_A_5(3AIM)
?
[Raw transfer]




MPD_B_11(3AIK)
?
[Raw transfer]




MPD_A_5(3AIO)
?
[Raw transfer]




BME_A_5(3DNM)
?
[Raw transfer]




MRD_B_9(3AIO)
?
[Raw transfer]




MPD_B_12(3AIN)
?
[Raw transfer]




MPD_B_9(3AIK)
?
[Raw transfer]




MPD_A_2(4OB7)
?
[Raw transfer]




MPD_A_2(4OB8)
?
[Raw transfer]




MRD_B_10(3AIM)
?
[Raw transfer]




2 PsiBlast_PDB 93.9041%-108 - C1 -1QZ3 - ? -
4 PsiBlast_PDB 92.5141%-106 - C1 -1EVQ 2.4 ?
3 PsiBlast_PDB 92.0541%-103 - C1 -1U4N - ? -
1 PsiBlast_PDB 89.7940%-102 - C1 -2HM7 - ? -
10 PsiBlast_PDB 88.6835%-118 - C1 -4P9N - ? -
86 HHSearch 88.1235%-104 - C1 -4V2I - ? -
8 PsiBlast_PDB 87.3536%-117 - C1 -3WJ1 - ? -
100 HHSearch 87.0744%-108 - C1 -2HM7 - ? -
5 PsiBlast_PDB 87.0239%-107 - C1 -2YH2 - ? -
82 HHSearch 86.9837%-104 - C1 -3QH4 - ? -
6 PsiBlast_PDB 86.7139%-109 - C1 -3ZWQ - ? -
16 PsiBlast_PDB 86.4339%-110 - C1 -4V2I - ? -
73 Fugue 84.4337% -89 - C1 -1JJI - ? -
39 PsiBlast_CBE 83.8739%-109 - C1 -4V2I - ? -
14 PsiBlast_PDB 83.6933%-105 - C1 -3AIM 2.5 ?
90 HHSearch 83.0641%-104 * C1 *1JJI - ? -
34 PsiBlast_CBE 82.7733%-104 - C1 -3AIM 2.8 ?
85 HHSearch 82.6936%-108 - C1 -4OB7 - ? -
36 PsiBlast_CBE 82.4233%-103 - C1 -3AIN 3.3 ?
24 PsiBlast_CBE 82.4033%-105 - C1 -3AIO 3.1 ?
15 PsiBlast_PDB 82.2833%-105 - C1 -3AIN 2.8 ?
11 PsiBlast_PDB 82.2033%-106 - C1 -3AIO 2.8 ?
12 PsiBlast_PDB 82.0433%-104 - C1 -3AIK 2.7 ?
26 PsiBlast_CBE 81.6233%-103 - C1 -3AIO 3.0 ?
37 PsiBlast_CBE 81.5833%-103 - C1 -3AIN 2.7 ?
27 PsiBlast_CBE 81.5433%-104 - C1 -3AIL 3.3 ?
30 PsiBlast_CBE 81.4833%-102 - C1 -3AIK 3.1 ?
13 PsiBlast_PDB 81.4433%-101 - C1 -3AIL 2.9 ?
31 PsiBlast_CBE 81.2733%-104 - C1 -3AIK 2.7 ?
33 PsiBlast_CBE 81.2333%-102 - C1 -3AIM 3.0 ?
25 PsiBlast_CBE 81.2033%-104 - C1 -3AIO 2.8 ?
35 PsiBlast_CBE 80.9733%-104 - C1 -3AIM 2.6 ?
38 PsiBlast_CBE 80.7133%-102 - C1 -3AIN 2.9 ?
29 PsiBlast_CBE 80.0033%-104 - C1 -3AIL 2.7 ?
32 PsiBlast_CBE 79.6433%-100 - C1 -3AIK 2.9 ?
28 PsiBlast_CBE 79.3233%-105 - C1 -3AIL 2.7 ?
40 PsiBlast_CBE 72.8538%-100 - C1 -4OB6 4.0 ?
17 PsiBlast_PDB 72.2738%-103 - C1 -4OB7 2.5 ?
18 PsiBlast_PDB 71.6838%-101 - C1 -4OB8 2.5 ?
54 PsiBlast_CBE 63.7534% -97 - C1 -3DNM 2.7 ?
51 PsiBlast_CBE 62.2934%-102 - C1 -3DNM 1.9 ?
44 PsiBlast_CBE 55.2033% -87 - C1 -3H18 3.3 ?
45 PsiBlast_CBE 50.4733% -84 - C1 -3H17 3.5 ?
58 PsiBlast_CBE 42.2739%-114 - C1 -2O7R 3.4 CXE1_ACTER
57 PsiBlast_CBE 40.6539%-114 - C1 -2O7V 4.0 CXE1_ACTER