@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2552c: (2016-05-11 )
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SKM_C_9(4P4L)
?
[Raw transfer]



SKM_A_4(4P4L)
?
[Raw transfer]



SKM_A_3(4P4G)
?
[Raw transfer]



SKM_B_7(4P4L)
?
[Raw transfer]



DHK_A_6(2O7Q)
DHQSD_ARATH
[Raw transfer]



SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]



DHK_A_5(2O7S)
DHQSD_ARATH
[Raw transfer]



DTV_A_20(1NYT)
AROE_ECOLI
[Raw transfer]



EDO_A_4(4XIJ)
?
[Raw transfer]
23 PsiBlast_CBE 98.54100%-136 - C6 -4P4L 3.8 ?
3 PsiBlast_PDB 98.28100%-136 - C6 -4P4N - ? -
2 PsiBlast_PDB 98.09100%-136 - C6 -4P4L 3.9 ?
25 PsiBlast_CBE 97.36100%-135 - C6 -4P4G - ? -
21 PsiBlast_CBE 97.12100%-134 - C6 -4P4N - ? -
1 PsiBlast_PDB 97.11100%-130 - C6 -4P4G 4.1 ?
22 PsiBlast_CBE 96.88100%-135 - C6 -4P4N - ? -
24 PsiBlast_CBE 95.32100%-133 - C6 -4P4L 3.9 ?
4 PsiBlast_PDB 86.6171%-131 - C6 -4XIJ - ? -
55 HHSearch 85.8970%-127 - C6 -4XIJ 2.9 ?
53 HHSearch 64.7427%-106 - C6 -3T4E - YDIB_SALTY -
60 HHSearch 64.4827%-108 - C6 -3FBT - ? -
54 HHSearch 63.9227%-105 * C6 *3TNL - AROE_LISMO -
72 HHSearch 63.7926%-102 - C6 -2HK9 - AROE_AQUAE -
10 PsiBlast_PDB 63.3526%-109 - C6 -1NVT - AROE_METJA -
6 PsiBlast_PDB 63.1928%-102 - C6 -3TNL - AROE_LISMO -
61 HHSearch 63.0627%-108 - C6 -1NVT - AROE_METJA -
67 HHSearch 62.6025%-103 - C6 -3DON - AROE_STAEQ -
44 Fugue 62.5226%-103 - C6 -3JYO - AROE_CORGL -
5 PsiBlast_PDB 62.4228%-101 - C6 -3TOZ - AROE_LISMO -
59 HHSearch 61.7031%-104 - C6 -2D5C 3.5 AROE_THET8