@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2924c: (2016-05-15 )
MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_C_2(1L2B)
?
[Raw transfer]

-

NACID_C_2(2F5O)
?
[Raw transfer]

-

NACID_C_3(3GPX)
?
[Raw transfer]

-

TRS_B_2(1TDH)
NEIL1_HUMAN
[Raw transfer]




NACID_B_1(1TDZ)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(4PDI)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(2XZU)
FPG_LACLC
[Raw transfer]

-

GOL_A_2(3TWL)
FPG_ARATH
[Raw transfer]




NACID_C_3(3GPY)
?
[Raw transfer]

-

NACID_C_3(3SAS)
?
[Raw transfer]

-

NACID_D_1(1NNJ)
FPG_LACLC
[Raw transfer]

-

GOL_D_8(3SAR)
?
[Raw transfer]




NACID_C_3(4G4Q)
?
[Raw transfer]

-

NACID_C_3(3JR5)
?
[Raw transfer]

-

NACID_D_1(1PJI)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(3GQ4)
?
[Raw transfer]

-

NACID_C_2(1R2Y)
?
[Raw transfer]

-

NACID_B_2(2XZF)
FPG_LACLC
[Raw transfer]

-

NACID_B_1(1XC8)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(3C58)
FPG_LACLC
[Raw transfer]

-

NACID_D_1(1PJJ)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(4G4R)
?
[Raw transfer]

-

NACID_C_2(1R2Z)
?
[Raw transfer]

-

CHAIN_D_4(4CIS)
?
[Raw transfer]

-

NACID_C_2(2F5Q)
?
[Raw transfer]

-

NACID_B_2(4PD2)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1L1T)
?
[Raw transfer]

-

NACID_C_2(1L1Z)
?
[Raw transfer]

-

NACID_C_2(1L2D)
?
[Raw transfer]

-

NACID_D_1(1PM5)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(4PDG)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1L2C)
?
[Raw transfer]

-

NACID_C_2(2F5S)
?
[Raw transfer]

-

NACID_B_2(4PD2)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(4G4N)
?
[Raw transfer]

-

NACID_B_2(4PCZ)
FPG_LACLC
[Raw transfer]

-

CHAIN_D_4(4CIS)
?
[Raw transfer]

-

NACID_I_2(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_D_3(3SAR)
?
[Raw transfer]

-

NACID_I_2(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_J_4(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_C_3(3JR4)
?
[Raw transfer]

-

NACID_C_3(3GQ3)
?
[Raw transfer]

-

NACID_C_3(3GPU)
?
[Raw transfer]

-

NACID_C_3(3GP1)
?
[Raw transfer]

-

NACID_C_3(3U6P)
?
[Raw transfer]

-

NACID_L_8(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_C_3(3GPP)
?
[Raw transfer]

-

NACID_C_3(3U6P)
?
[Raw transfer]

-

NACID_C_3(3GO8)
?
[Raw transfer]

-

NACID_C_3(3GQ5)
?
[Raw transfer]

-

NACID_C_3(3U6L)
?
[Raw transfer]

-

NACID_K_6(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_C_3(3U6D)
?
[Raw transfer]

-

NACID_C_3(3U6O)
?
[Raw transfer]

-

NACID_C_3(3SAU)
?
[Raw transfer]

-

NACID_C_3(3U6M)
?
[Raw transfer]

-

NACID_C_3(3SAT)
?
[Raw transfer]

-

NACID_D_2(2F5P)
?
[Raw transfer]

-

NACID_D_3(3SAV)
?
[Raw transfer]

-

NACID_C_3(3SBJ)
?
[Raw transfer]

-

NACID_C_2(2F5N)
?
[Raw transfer]

-

NACID_C_3(3U6C)
?
[Raw transfer]

-

NACID_C_3(3SAW)
?
[Raw transfer]

-

NACID_C_3(3U6Q)
?
[Raw transfer]

-

NACID_C_3(3U6E)
?
[Raw transfer]

-

6 PsiBlast_PDB 95.3134% -89 - C7 -1R2Y 10.2 ?
21 PsiBlast_CBE 94.9134% -90 - C7 -3GQ4 8.0 ?
20 PsiBlast_PDB 94.4334% -89 - C7 -3GPY 8.1 ?
12 PsiBlast_PDB 94.3834% -91 - C7 -2F5S 9.4 ?
7 PsiBlast_PDB 94.0734% -89 - C7 -1R2Z 7.2 ?
3 PsiBlast_PDB 94.0235% -92 - C7 -1L2B 4.8 ?
22 PsiBlast_CBE 93.9634% -87 - C7 -3JR5 7.6 ?
4 PsiBlast_PDB 93.3035% -96 - C7 -1L2C 6.2 ?
11 PsiBlast_PDB 93.2934% -88 - C7 -2F5Q 10.5 ?
2 PsiBlast_PDB 92.8735% -93 - C7 -1L1Z 4.3 ?
5 PsiBlast_PDB 92.6535% -93 - C7 -1L2D 7.2 ?
23 PsiBlast_CBE 92.2634% -95 - C7 -3JR4 6.0 ?
13 PsiBlast_PDB 91.8334%-102 - C7 -3SAR 6.7 ?
1 PsiBlast_PDB 91.5935% -95 - C7 -1L1T 6.8 ?
18 PsiBlast_PDB 90.0634%-100 - C7 -3GP1 5.5 ?
35 PsiBlast_CBE 89.9234% -97 - C7 -3SAS 2.9 ?
9 PsiBlast_PDB 89.9134%-102 - C7 -2F5O 6.2 ?
15 PsiBlast_PDB 89.8434%-101 - C7 -3SAV 5.1 ?
10 PsiBlast_PDB 89.8034%-100 - C7 -2F5P 5.6 ?
14 PsiBlast_PDB 89.6234%-102 - C7 -3SAU 5.7 ?
27 PsiBlast_CBE 89.5734%-101 - C7 -3U6O 7.6 ?
32 PsiBlast_CBE 89.5534%-100 - C7 -3U6C 6.3 ?
16 PsiBlast_PDB 89.5334%-101 - C7 -3GPP 6.1 ?
60 PsiBlast_CBE 89.4932%-106 - C7 -3GQ3 6.9 ?
36 PsiBlast_CBE 89.3434%-101 - C7 -4G4N 6.6 ?
37 PsiBlast_CBE 89.3234%-100 - C7 -4G4Q 5.6 ?
34 PsiBlast_CBE 89.2334%-100 - C7 -3SAT 4.1 ?
19 PsiBlast_PDB 89.1534%-101 - C7 -3SBJ 5.3 ?
17 PsiBlast_PDB 89.0134%-104 - C7 -3GQ5 6.8 ?
8 PsiBlast_PDB 88.9834%-101 - C7 -2F5N 3.7 ?
31 PsiBlast_CBE 88.8934%-101 - C7 -3U6D 6.3 ?
28 PsiBlast_CBE 88.7734% -98 - C7 -3U6M 7.3 ?
25 PsiBlast_CBE 88.7034%-100 - C7 -3U6Q 7.2 ?
30 PsiBlast_CBE 88.4434%-101 - C7 -3U6E 6.5 ?
67 HHSearch 88.3836%-108 * C7 *3U6P 6.1 ?
59 PsiBlast_CBE 88.3732%-108 - C7 -3GO8 5.5 ?
29 PsiBlast_CBE 88.3234% -99 - C7 -3U6L 6.7 ?
33 PsiBlast_CBE 88.1934%-104 - C7 -3SAW 5.2 ?
50 PsiBlast_CBE 88.1331% -81 - C7 -1PJI 4.6 FPG_LACLC
61 PsiBlast_CBE 88.1232%-108 - C7 -3GPX 5.1 ?
26 PsiBlast_CBE 88.0734%-103 - C7 -3U6P 6.1 ?
62 PsiBlast_CBE 87.9231%-102 - C7 -3GPU 5.1 ?
39 PsiBlast_CBE 87.9234% -98 - C7 -4G4R 6.5 ?
48 PsiBlast_CBE 87.7431% -82 - C7 -1XC8 6.4 FPG_LACLC
56 PsiBlast_CBE 87.1131% -80 - C7 -1PJJ 4.6 FPG_LACLC
69 HHSearch 87.1034% -86 - C7 -4PD2 4.7 FPG_LACLC
41 PsiBlast_CBE 87.1032% -87 - C7 -4CIS 5.8 ?
49 PsiBlast_CBE 87.0431% -79 - C7 -1PM5 4.8 FPG_LACLC
40 PsiBlast_CBE 86.9932% -80 - C7 -4CIS 6.3 ?
46 PsiBlast_CBE 86.6531% -80 - C7 -2XZU 4.9 FPG_LACLC
43 PsiBlast_CBE 86.6231% -85 - C7 -4PDI 7.3 FPG_LACLC
42 PsiBlast_CBE 86.4831% -81 - C7 -1TDZ 7.0 FPG_LACLC
47 PsiBlast_CBE 86.3931% -81 - C7 -2XZF 6.5 FPG_LACLC
55 PsiBlast_CBE 86.2631% -78 - C7 -4PCZ 5.3 FPG_LACLC
45 PsiBlast_CBE 86.1931% -79 - C7 -3C58 7.1 FPG_LACLC
44 PsiBlast_CBE 86.1431% -84 - C7 -4PDG 4.6 FPG_LACLC
57 PsiBlast_CBE 85.6131% -84 - C7 -1NNJ 3.8 FPG_LACLC
58 PsiBlast_CBE 85.5031% -80 - C7 -4PD2 4.7 FPG_LACLC
54 PsiBlast_CBE 85.2632% -99 - C7 -1K82 6.3 FPG_ECOLI
65 HHSearch 85.1933% -94 - C7 -1K82 9.9 FPG_ECOLI
51 PsiBlast_CBE 85.1732% -98 - C7 -1K82 5.8 FPG_ECOLI
53 PsiBlast_CBE 83.9532% -95 - C7 -1K82 4.9 FPG_ECOLI
52 PsiBlast_CBE 83.5532% -96 - C7 -1K82 4.6 FPG_ECOLI
66 HHSearch 78.5830% -78 - C7 -3TWL 2.9 FPG_ARATH