@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0143: (2015-12-23 )
MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NOS_B_10(3B9X)
RIHB_ECOLI
[Raw transfer]



DNB_A_7(3G5I)
RIHA_ECOLI
[Raw transfer]



PIR_A_9(2MAS)
IUNH_CRIFA
[Raw transfer]



PIR_C_11(2MAS)
IUNH_CRIFA
[Raw transfer]



PIR_B_10(2MAS)
IUNH_CRIFA
[Raw transfer]



PIR_D_12(2MAS)
IUNH_CRIFA
[Raw transfer]



DNB_D_12(3MKN)
?
[Raw transfer]



DNB_C_10(3MKN)
?
[Raw transfer]



PIR_A_9(2MAS)
IUNH_CRIFA
[Raw transfer]



DNB_A_6(3MKN)
?
[Raw transfer]



PIR_A_9(2MAS)
IUNH_CRIFA
[Raw transfer]



NOS_D_12(3B9X)
RIHB_ECOLI
[Raw transfer]



NOS_A_9(3B9X)
RIHB_ECOLI
[Raw transfer]



RIB_A_2(1YOE)
RIHA_ECOLI
[Raw transfer]



DNB_C_11(3G5I)
RIHA_ECOLI
[Raw transfer]



GOL_B_10(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_A_9(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_A_9(1Q8F)
RIHB_ECOLI
[Raw transfer]



NOS_C_11(3B9X)
RIHB_ECOLI
[Raw transfer]



DNB_D_13(3G5I)
RIHA_ECOLI
[Raw transfer]



GOL_A_6(3T8I)
?
[Raw transfer]



GOL_C_22(3T8I)
?
[Raw transfer]



GOL_C_15(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_D_16(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_A_6(3T8I)
?
[Raw transfer]



GOL_B_13(3T8I)
?
[Raw transfer]



GOL_B_14(1Q8F)
RIHB_ECOLI
[Raw transfer]
57 HHSearch 98.3940% -87 * C5 *1Q8F 3.0 RIHB_ECOLI
33 PsiBlast_CBE 98.0142% -92 - C5 -3G5I 3.8 RIHA_ECOLI
3 PsiBlast_PDB 98.0141% -80 - C5 -1Q8F 3.0 RIHB_ECOLI
31 PsiBlast_CBE 97.9441% -79 - C5 -3B9X 4.9 RIHB_ECOLI
26 PsiBlast_CBE 97.9141% -79 - C5 -1Q8F 2.9 RIHB_ECOLI
29 PsiBlast_CBE 97.8641% -79 - C5 -3B9X 4.2 RIHB_ECOLI
4 PsiBlast_PDB 97.7441% -80 - C5 -3B9X 5.1 RIHB_ECOLI
6 PsiBlast_PDB 97.7342% -94 - C5 -3G5I 5.2 RIHA_ECOLI
1 PsiBlast_PDB 97.6741% -81 - C5 -3MKM - ? -
32 PsiBlast_CBE 97.6342% -94 - C5 -3G5I 4.3 RIHA_ECOLI
28 PsiBlast_CBE 97.3541% -77 - C5 -1Q8F 3.0 RIHB_ECOLI
23 PsiBlast_CBE 97.2441% -80 - C5 -3MKM - ? -
21 PsiBlast_CBE 96.7941% -80 - C5 -3MKN 4.8 ?
5 PsiBlast_PDB 96.7742% -93 - C5 -1YOE 3.1 RIHA_ECOLI
24 PsiBlast_CBE 96.6241% -82 - C5 -3MKM - ? -
27 PsiBlast_CBE 96.4941% -81 - C5 -1Q8F 2.4 RIHB_ECOLI
2 PsiBlast_PDB 96.4341% -83 - C5 -3MKN 5.2 ?
22 PsiBlast_CBE 96.0641% -82 - C5 -3MKN 4.3 ?
30 PsiBlast_CBE 95.8741% -78 - C5 -3B9X 3.7 RIHB_ECOLI
25 PsiBlast_CBE 94.1841% -82 - C5 -3MKM - ? -
58 HHSearch 91.6632% -85 - C5 -3T8I 3.0 ?
38 PsiBlast_CBE 90.6133% -94 - C5 -2MAS 4.5 IUNH_CRIFA
39 PsiBlast_CBE 90.4833% -93 - C5 -2MAS 4.5 IUNH_CRIFA
66 Fugue 90.3232% -93 - C5 -2MAS 4.6 IUNH_CRIFA
9 PsiBlast_PDB 89.9833% -94 - C5 -2MAS 4.7 IUNH_CRIFA
56 HHSearch 89.8732% -92 - C5 -2MAS 4.6 IUNH_CRIFA
37 PsiBlast_CBE 89.6633% -95 - C5 -2MAS 4.5 IUNH_CRIFA
11 PsiBlast_PDB 87.7432% -80 - C5 -3T8I 3.0 ?
44 PsiBlast_CBE 87.4532% -78 - C5 -3T8I 2.9 ?
43 PsiBlast_CBE 86.4732% -78 - C5 -3T8I 2.8 ?