@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4170: (2016-02-24 )
MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVMDTGLRRNRFARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGATTFFLNGVFEPDAEQMSRLDRRGVTIEREAVVALGGARADVTLASGRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAALAAGNVAIAVGDGARTGGAAHHSLLFR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_7(3FBS)
?
[Raw transfer]



FAD_A_3(3FBS)
?
[Raw transfer]



FAD_A_3(3FBS)
?
[Raw transfer]



FAD_A_3(4NTE)
?
[Raw transfer]



FAD_A_5(4JNA)
?
[Raw transfer]



FAD_B_10(4NTE)
?
[Raw transfer]



FAD_B_9(4JN9)
?
[Raw transfer]



FAD_A_3(4JN9)
?
[Raw transfer]



FAD_B_10(4JNA)
?
[Raw transfer]



EDO_A_7(4JN9)
?
[Raw transfer]



EDO_B_12(4JN9)
?
[Raw transfer]
1 PsiBlast_PDB 97.3759%-106 - C1 -3FBS 13.3 ?
21 PsiBlast_CBE 97.1859%-108 - C1 -3FBS 13.4 ?
3 PsiBlast_PDB 96.1356%-108 - C1 -4JNA 13.3 ?
2 PsiBlast_PDB 95.7756%-111 - C1 -4NTE 13.3 ?
24 PsiBlast_CBE 95.7156%-107 - C1 -4JN9 13.2 ?
22 PsiBlast_CBE 95.5156%-111 - C1 -4NTE 13.2 ?
23 PsiBlast_CBE 95.4056%-107 - C1 -4JNA 13.1 ?
4 PsiBlast_PDB 95.3156%-107 - C1 -4JN9 13.4 ?
120 HHSearch 94.4558%-102 - C1 -3FBS 13.3 ?
101 Fugue 81.4131%-110 - C1 -4NTC - ? -
5 PsiBlast_PDB 79.3635%-110 - C3 -4NTD - ? -
6 PsiBlast_PDB 79.0427%-115 - C1 -4FK1 - ? -
7 PsiBlast_PDB 76.3629% -98 - C1 -4NTC - ? -
14 PsiBlast_PDB 75.8223%-108 - C1 -3F8P - ? -
15 PsiBlast_PDB 75.0523%-110 - C1 -3F8R - ? -
116 HHSearch 71.8023% -96 - C1 -1HYU - AHPF_SALTY -
109 HHSearch 71.7522%-104 - C1 -3F8D - ? -
129 HHSearch 69.7920% -96 - C1 -2Q0L - TRXB_HELPY -
10 PsiBlast_PDB 68.1524% -94 * C3 *2A87 - TRXB_MYCTU -
112 HHSearch 67.5322% -88 - C1 -3R9U - ? -