@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5426: (2016-03-07 )
MSALVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQFRANQTETVLDNPDPRDA

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C2R_I_9(2NSL)
PURE_ECOLI
[Raw transfer]




NIA_A_2(2NSH)
PURE_ECOLI
[Raw transfer]




NIA_A_2(2ATE)
PURE_ECOLI
[Raw transfer]




C2R_I_9(2NSJ)
PURE_ECOLI
[Raw transfer]




AIR_I_9(2FWJ)
?
[Raw transfer]




AIR_A_3(2FWI)
?
[Raw transfer]




CIT_M_13(2FWP)
?
[Raw transfer]




CIT_B_3(2FW6)
?
[Raw transfer]




CIT_A_3(1U11)
?
[Raw transfer]




CIT_A_3(1U11)
?
[Raw transfer]




GOL_B_9(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_C_21(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_D_23(3LP6)
PURE_MYCTU
[Raw transfer]




CIT_B_4(1U11)
?
[Raw transfer]




FMT_D_26(3LP6)
PURE_MYCTU
[Raw transfer]




ACY_I_9(2FW1)
?
[Raw transfer]




ACY_M_13(2FW1)
?
[Raw transfer]




62 HHSearch 96.8371%-135 - C6 -3OOW - ? -
2 PsiBlast_PDB 96.2068%-134 - C6 -3OPQ - ? -
1 PsiBlast_PDB 95.6968%-135 - C6 -3OOW - ? -
20 PsiBlast_PDB 92.9462%-132 - C6 -2ATE 6.7 PURE_ECOLI
57 HHSearch 92.3962%-133 * C6 *1U11 3.8 ?
28 PsiBlast_CBE 92.1462%-136 - C6 -1U11 3.7 ?
4 PsiBlast_PDB 92.1170%-143 - C6 -4B4K - ? -
29 PsiBlast_CBE 92.1062%-132 - C6 -2FWP 4.1 ?
23 PsiBlast_CBE 92.0670%-141 - C6 -4AY4 - ? -
58 HHSearch 91.9864%-132 - C6 -3KUU - ? -
11 PsiBlast_PDB 91.7763%-132 - C6 -2NSL 6.0 PURE_ECOLI
24 PsiBlast_CBE 91.7270%-139 - C6 -4AY3 - ? -
18 PsiBlast_PDB 91.7262%-135 - C6 -2FWB - ? -
17 PsiBlast_PDB 91.6762%-135 - C6 -2FW9 - ? -
5 PsiBlast_PDB 91.6570%-141 - C6 -4AY3 - ? -
6 PsiBlast_PDB 91.5270%-138 - C6 -4AY4 - ? -
12 PsiBlast_PDB 91.3363%-131 - C6 -2NSH 5.7 PURE_ECOLI
25 PsiBlast_CBE 91.2170%-140 - C6 -4AY3 - ? -
9 PsiBlast_PDB 91.1762%-134 - C6 -2FWJ 4.7 ?
22 PsiBlast_CBE 91.0770%-139 - C6 -4AY4 - ? -
10 PsiBlast_PDB 91.0662%-135 - C6 -1U11 3.8 ?
27 PsiBlast_CBE 90.9162%-134 - C6 -2FW1 3.3 ?
13 PsiBlast_PDB 90.6763%-128 - C6 -2NSJ 5.9 PURE_ECOLI
19 PsiBlast_PDB 90.4362%-135 - C6 -2FWI 3.8 ?
8 PsiBlast_PDB 90.1462%-134 - C6 -2FW1 3.6 ?
30 PsiBlast_CBE 89.6862%-131 - C6 -2FW6 3.7 ?
61 HHSearch 87.0656%-129 - C6 -3LP6 3.4 PURE_MYCTU
31 PsiBlast_CBE 86.9360%-132 - C6 -3LP6 3.4 PURE_MYCTU
32 PsiBlast_CBE 86.3660%-132 - C6 -3LP6 3.6 PURE_MYCTU
33 PsiBlast_CBE 85.7160%-129 - C6 -3LP6 3.6 PURE_MYCTU
34 PsiBlast_CBE 85.1660%-131 - C6 -3LP6 3.4 PURE_MYCTU