@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1234: (2018-01-07 )
MKLDGYTRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNTVVNENGNLIGYNTDGKGFFKCLPSFTISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPETLLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKYQ

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_D_11(2HK9)
AROE_AQUAE
[Raw transfer]



NAD_D_13(3TNL)
AROE_LISMO
[Raw transfer]



NAD_B_8(3TNL)
AROE_LISMO
[Raw transfer]



NDP_B_6(3PHI)
AROE_HELPY
[Raw transfer]



NDP_A_4(3PHI)
AROE_HELPY
[Raw transfer]



NAP_B_7(2HK9)
AROE_AQUAE
[Raw transfer]



SKM_A_2(3PHH)
AROE_HELPY
[Raw transfer]



SKM_A_2(4FOS)
AROE_HELPY
[Raw transfer]



SKM_B_5(3PHI)
AROE_HELPY
[Raw transfer]



DHK_B_4(3PHJ)
AROE_HELPY
[Raw transfer]



SKM_A_6(3TNL)
AROE_LISMO
[Raw transfer]



SKM_D_12(2HK9)
AROE_AQUAE
[Raw transfer]



DHK_A_3(3PHJ)
AROE_HELPY
[Raw transfer]



SKM_A_6(3TNL)
AROE_LISMO
[Raw transfer]



SKM_B_8(2HK9)
AROE_AQUAE
[Raw transfer]



SKM_A_5(2EV9)
AROE_THET8
[Raw transfer]



SKM_C_11(3TNL)
AROE_LISMO
[Raw transfer]



SKM_B_6(2EV9)
AROE_THET8
[Raw transfer]



SKM_B_4(4FR5)
AROE_HELPY
[Raw transfer]



SKM_C_10(2HK9)
AROE_AQUAE
[Raw transfer]



SKM_A_3(3PHI)
AROE_HELPY
[Raw transfer]



SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]



SKM_A_6(2HK9)
AROE_AQUAE
[Raw transfer]



SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]



SKM_C_7(3PGJ)
AROE_VIBCH
[Raw transfer]



SKM_B_7(3SEF)
AROE_VIBCH
[Raw transfer]



SKM_D_8(3PGJ)
AROE_VIBCH
[Raw transfer]



GOL_A_2(2NLO)
AROE_CORGL
[Raw transfer]



SKM_B_8(2D5C)
AROE_THET8
[Raw transfer]



SKM_B_6(2EV9)
AROE_THET8
[Raw transfer]



SKM_A_2(3DOO)
AROE_STAEQ
[Raw transfer]



SKM_A_5(3PGJ)
AROE_VIBCH
[Raw transfer]



SKM_A_3(4FR5)
AROE_HELPY
[Raw transfer]



SKM_B_6(3PGJ)
AROE_VIBCH
[Raw transfer]



QIC_A_3(3JYP)
AROE_CORGL
[Raw transfer]



SKM_A_3(4FQ8)
AROE_HELPY
[Raw transfer]



SKM_C_8(3SEF)
AROE_VIBCH
[Raw transfer]



DTV_A_20(1NYT)
AROE_ECOLI
[Raw transfer]
26 PsiBlast_CBE 86.6042% -32 - C5 -3TOZ - AROE_LISMO -
25 PsiBlast_CBE 86.1942% -32 - C5 -3TOZ - AROE_LISMO -
1 PsiBlast_PDB 86.1642% -32 - C5 -3TOZ - AROE_LISMO -
2 PsiBlast_PDB 86.1442% -32 - C5 -3TNL 3.1 AROE_LISMO
29 PsiBlast_CBE 86.0942% -33 - C5 -3TNL 3.0 AROE_LISMO
24 PsiBlast_CBE 85.7642% -32 - C5 -3TOZ - AROE_LISMO -
23 PsiBlast_CBE 85.0942% -32 - C5 -3TOZ - AROE_LISMO -
30 PsiBlast_CBE 84.8242% -30 - C5 -3TNL 7.7 AROE_LISMO
21 PsiBlast_CBE 84.8042% -32 - C5 -3TOZ - AROE_LISMO -
5 PsiBlast_PDB 84.7734% -48 - C5 -1VI2 - YDIB_ECOLI -
28 PsiBlast_CBE 84.7442% -30 - C5 -3TNL 7.9 AROE_LISMO
80 HHSearch 84.3536% -46 - C5 -3T4E - YDIB_SALTY -
4 PsiBlast_PDB 84.0134% -44 - C5 -1O9B - YDIB_ECOLI -
27 PsiBlast_CBE 83.9942% -31 - C5 -3TOZ - AROE_LISMO -
22 PsiBlast_CBE 83.9142% -29 - C5 -3TOZ - AROE_LISMO -
76 HHSearch 83.3036% -46 - C5 -1NPD - YDIB_ECOLI -
77 HHSearch 83.2143% -19 * C5 *3TNL 3.1 AROE_LISMO
3 PsiBlast_PDB 82.9334% -39 - C5 -1NPD - YDIB_ECOLI -
7 PsiBlast_PDB 81.8235% -62 - C5 -2HK7 - AROE_AQUAE -
6 PsiBlast_PDB 81.7336% -39 - C5 -3T4E - YDIB_SALTY -
32 PsiBlast_CBE 81.5135% -64 - C5 -2HK9 8.2 AROE_AQUAE
9 PsiBlast_PDB 81.3835% -66 - C5 -2HK9 3.6 AROE_AQUAE
34 PsiBlast_CBE 80.3535% -61 - C5 -2HK9 7.2 AROE_AQUAE
40 PsiBlast_CBE 80.1436%-115 - C5 -2D5C 3.8 AROE_THET8
16 PsiBlast_PDB 77.3436% -90 - C5 -2D5C 3.5 AROE_THET8
17 PsiBlast_PDB 76.2336% -88 - C5 -2EV9 3.3 AROE_THET8
33 PsiBlast_CBE 75.8635% -53 - C5 -2HK9 3.2 AROE_AQUAE
39 PsiBlast_CBE 75.7236% -90 - C5 -2EV9 3.2 AROE_THET8
18 PsiBlast_PDB 73.8734% -55 - C5 -1NYT 2.0 AROE_ECOLI
94 HHSearch 72.7333% -56 - C5 -2EV9 3.2 AROE_THET8
93 HHSearch 72.4633% -56 - C5 -2D5C 3.4 AROE_THET8
12 PsiBlast_PDB 71.8134% -52 - C5 -3DOO 3.1 AROE_STAEQ
53 PsiBlast_CBE 70.6932% -42 - C5 -3PGJ 3.1 AROE_VIBCH
54 PsiBlast_CBE 69.6032% -44 - C5 -3PGJ 3.5 AROE_VIBCH
55 PsiBlast_CBE 68.9832% -38 - C5 -3PGJ 3.1 AROE_VIBCH
56 PsiBlast_CBE 68.8232% -43 - C5 -3PGJ 3.0 AROE_VIBCH
61 PsiBlast_CBE 68.5231% 2 - C5 -3PHI 6.5 AROE_HELPY
64 PsiBlast_CBE 68.4131% -3 - C5 -4FR5 3.2 AROE_HELPY
63 PsiBlast_CBE 67.8831% -6 - C5 -4FOS 3.4 AROE_HELPY
51 PsiBlast_CBE 67.8832% -38 - C5 -3SEF 2.8 AROE_VIBCH
62 PsiBlast_CBE 67.7531% -7 - C5 -3PHH 4.0 AROE_HELPY
60 PsiBlast_CBE 67.2131% 0 - C5 -3PHI 7.8 AROE_HELPY
67 PsiBlast_CBE 66.9331% -2 - C5 -4FQ8 3.0 AROE_HELPY
65 PsiBlast_CBE 66.8731% -1 - C5 -4FR5 3.4 AROE_HELPY
59 PsiBlast_CBE 64.8131% -4 - C5 -3PHJ 3.9 AROE_HELPY
58 PsiBlast_CBE 64.7131% -3 - C5 -3PHJ 3.8 AROE_HELPY
50 PsiBlast_CBE 64.5932% -49 - C5 -3SEF 4.6 AROE_VIBCH