@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR14: (2017-11-30 )
MTKLVVFSGAGMSAESGISTFRDSNGLWENYDIQQVATPEAWERNPALVQRFYNERRKNILEAQPNEAHQYIAKLQDHYDVQVITQNIDDPHERAGSQNVLHLHGNIRLAKSSGPDAQYTTQFYEVNGWKLDLEQDFCPNGYPLRPHVVWFGEAVPAYEEAIRLVQSADIFIVIGSTLSVYPVAALVHEIPHYSKAYYIAPQADHSRVPPQYKLLNMTATEGMHELFNQLTS

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CGK_C_7(4F56)
SIR5_HUMAN
[Raw transfer]




SVR_B_3(2NYR)
SIR5_HUMAN
[Raw transfer]




CGK_D_8(4F56)
SIR5_HUMAN
[Raw transfer]




APR_A_3(1M2G)
NPD1_ARCFU
[Raw transfer]




NAD_A_6(3RIY)
SIR5_HUMAN
[Raw transfer]




OAD_B_5(1M2N)
NPD1_ARCFU
[Raw transfer]




APR_A_3(1M2J)
NPD1_ARCFU
[Raw transfer]




APR_A_3(1M2H)
NPD1_ARCFU
[Raw transfer]




APR_A_3(1M2K)
NPD1_ARCFU
[Raw transfer]




NAD_A_4(2H4H)
NPD_THEMA
[Raw transfer]




NAD_B_8(3RIY)
SIR5_HUMAN
[Raw transfer]




CNA_A_6(4G1C)
SIR5_HUMAN
[Raw transfer]




EPE_B_6(4UTV)
SIR5_DANRE
[Raw transfer]




EPE_B_5(4UTN)
SIR5_DANRE
[Raw transfer]




EPE_B_7(4UUB)
SIR5_DANRE
[Raw transfer]




NAD_B_6(1ICI)
NPD1_ARCFU
[Raw transfer]




WOC_A_5(4UU8)
SIR5_DANRE
[Raw transfer]




NAD_A_5(1ICI)
NPD1_ARCFU
[Raw transfer]




NX6_D_12(4UUA)
SIR5_DANRE
[Raw transfer]




APR_A_7(2H59)
NPD_THEMA
[Raw transfer]




3NP_C_12(4UTX)
SIR5_DANRE
[Raw transfer]




EPE_B_11(4UU7)
SIR5_DANRE
[Raw transfer]




FSL_C_9(4UTV)
SIR5_DANRE
[Raw transfer]




JO3_D_12(4UU7)
SIR5_DANRE
[Raw transfer]




EPE_B_8(4UU8)
SIR5_DANRE
[Raw transfer]




EPE_B_6(4UTZ)
SIR5_DANRE
[Raw transfer]




0L1_D_10(4UTZ)
SIR5_DANRE
[Raw transfer]




OAD_B_9(4BV2)
NPD_THEMA
[Raw transfer]




DZD_A_4(3D4B)
NPD_THEMA
[Raw transfer]




SU8_D_11(4UUB)
SIR5_DANRE
[Raw transfer]




GUA_C_11(4UTR)
SIR5_DANRE
[Raw transfer]




NAD_B_25(1YC2)
NPD2_ARCFU
[Raw transfer]




EPE_B_8(4UTX)
SIR5_DANRE
[Raw transfer]




NAD_C_26(1YC2)
NPD2_ARCFU
[Raw transfer]




EPE_B_7(4UUA)
SIR5_DANRE
[Raw transfer]




APR_A_9(2B4Y)
SIR5_HUMAN
[Raw transfer]




OAD_A_7(4BV2)
NPD_THEMA
[Raw transfer]




OAD_A_5(2H4J)
NPD_THEMA
[Raw transfer]




EDO_B_8(4UTN)
SIR5_DANRE
[Raw transfer]




EDO_B_9(4UU8)
SIR5_DANRE
[Raw transfer]




NCA_A_4(1YC5)
NPD_THEMA
[Raw transfer]




NCA_A_4(1YC5)
NPD_THEMA
[Raw transfer]




MCM_B_4(5BWL)
SIR5_HUMAN
[Raw transfer]




MCM_B_4(5BWL)
SIR5_HUMAN
[Raw transfer]




STL_B_6(4HDA)
SIR5_HUMAN
[Raw transfer]




87 HHSearch 89.0438% -20 - C3 -1M2K - NPD1_ARCFU -
81 HHSearch 88.3633% -28 - C3 -2H59 - NPD_THEMA -
82 HHSearch 86.6041% 0 - C3 -1S5P - NPD_ECOLI -
86 HHSearch 84.3738% -17 - C3 -1M2N - NPD1_ARCFU -
6 PsiBlast_PDB 84.2340% -34 - C3 -1M2J 8.8 NPD1_ARCFU
2 PsiBlast_PDB 84.1141% -36 - C3 -1M2G 8.6 NPD1_ARCFU
84 HHSearch 83.5936% -28 - C3 -1S7G - NPD2_ARCFU -
5 PsiBlast_PDB 82.9840% -36 - C3 -1M2H 8.5 NPD1_ARCFU
7 PsiBlast_PDB 82.1440% -31 - C3 -1M2K 8.7 NPD1_ARCFU
80 HHSearch 81.6333% -34 - C3 -1YC5 3.2 NPD_THEMA
22 PsiBlast_CBE 81.3940% -29 - C3 -1M2N 5.7 NPD1_ARCFU
4 PsiBlast_PDB 81.1841% -21 - C3 -4TWI - NPD1_ARCFU -
50 PsiBlast_CBE 80.4532% -20 - C3 -4UTN 3.2 SIR5_DANRE
40 PsiBlast_CBE 80.4532% -26 - C3 -4UU8 3.0 SIR5_DANRE
3 PsiBlast_PDB 79.4141% -30 - C3 -1ICI 6.2 NPD1_ARCFU
47 PsiBlast_CBE 79.3532% -28 - C3 -4UTV 3.5 SIR5_DANRE
49 PsiBlast_CBE 79.3332% -24 - C3 -4UTR - SIR5_DANRE -
45 PsiBlast_CBE 79.0732% -23 - C3 -4UTX 3.6 SIR5_DANRE
46 PsiBlast_CBE 79.0532% -28 - C3 -4UTX 3.1 SIR5_DANRE
8 PsiBlast_PDB 79.0440% -31 - C3 -1M2N - NPD1_ARCFU -
42 PsiBlast_CBE 78.7832% -30 - C3 -4UU7 3.1 SIR5_DANRE
39 PsiBlast_CBE 78.5832% -25 * C3 *4UU8 3.1 SIR5_DANRE
44 PsiBlast_CBE 78.4232% -26 - C3 -4UTZ 2.6 SIR5_DANRE
20 PsiBlast_PDB 78.1732% -24 - C3 -4UTR 2.5 SIR5_DANRE
41 PsiBlast_CBE 78.0332% -23 - C3 -4UU7 2.4 SIR5_DANRE
48 PsiBlast_CBE 78.0032% -28 - C3 -4UTV 3.4 SIR5_DANRE
88 HHSearch 77.9730% -18 - C3 -5BWL 3.6 SIR5_HUMAN
35 PsiBlast_CBE 77.8332% -26 - C3 -4UUB 3.1 SIR5_DANRE
38 PsiBlast_CBE 77.5832% -23 - C3 -4UUA 3.7 SIR5_DANRE
43 PsiBlast_CBE 77.1532% -23 - C3 -4UTZ 2.7 SIR5_DANRE
36 PsiBlast_CBE 77.1432% -27 - C3 -4UUB 3.3 SIR5_DANRE
37 PsiBlast_CBE 76.6732% -23 - C3 -4UUA 2.8 SIR5_DANRE
21 PsiBlast_CBE 76.4141% -18 - C3 -1ICI 6.1 NPD1_ARCFU
30 PsiBlast_CBE 73.3236% -6 - C3 -4F56 9.0 SIR5_HUMAN
68 PsiBlast_CBE 73.1938% -17 - C3 -2H59 7.1 NPD_THEMA
56 PsiBlast_CBE 72.0839% -37 - C3 -3D4B 7.9 NPD_THEMA
14 PsiBlast_PDB 72.0736% -6 - C3 -5BWL 3.6 SIR5_HUMAN
57 PsiBlast_CBE 71.6739% -30 - C3 -2H4J 5.4 NPD_THEMA
33 PsiBlast_CBE 71.3436% -6 - C3 -2NYR 7.8 SIR5_HUMAN
13 PsiBlast_PDB 71.1736% -7 - C3 -4F56 10.5 SIR5_HUMAN
31 PsiBlast_CBE 70.6336% -3 - C3 -3RIY 10.3 SIR5_HUMAN
51 PsiBlast_CBE 70.4339% -36 - C3 -4BV2 4.5 NPD_THEMA
64 PsiBlast_CBE 70.1639% -37 - C3 -1YC5 3.2 NPD_THEMA
15 PsiBlast_PDB 69.9736% -4 - C3 -4G1C 9.3 SIR5_HUMAN
34 PsiBlast_CBE 69.6936% -7 - C3 -4HDA 2.9 SIR5_HUMAN
11 PsiBlast_PDB 69.5836% -7 - C3 -3RIY 9.5 SIR5_HUMAN
52 PsiBlast_CBE 69.2339% -33 - C3 -4BV2 4.9 NPD_THEMA
25 PsiBlast_CBE 68.4241% -27 - C3 -1YC2 8.5 NPD2_ARCFU
18 PsiBlast_PDB 68.2136% -5 - C3 -2B4Y 3.8 SIR5_HUMAN
65 PsiBlast_CBE 67.0238% -21 - C3 -2H4H 9.4 NPD_THEMA
26 PsiBlast_CBE 64.2641% -27 - C3 -1YC2 8.9 NPD2_ARCFU