@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2113: (2016-04-01 )
MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGDDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLLLSEQLSKLFTI

Atome Classification :

(20 SA) --.........10........20.....-...30..-......40........50.-.......60......--.--.70........80.......----.90.....-...100---.......110--------.........120...-....130..--.....-140-.......150.......160---.......170.---......180.....-..190.....-..200.....--..210.......220....-..-.230-.........240.----......------250----------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --MNEAVKTLDGWFCLHDFRSIDWAAWR-ELNPGNQ-ELMLNELSHFLSDMEITKN-IGEGEHTIYSILGQK--A--DLVFFTLRDSLEALNEVENR----FNKLAIAD-YLLPTY---SYISVVEL----------SNYLASHMAGGDDPY-QNKGVRARL--YPALP-PKK-HICFYPMSKKRDGADNWYML---PMEERQQLIRD---HGLIGRSYAGKVQQ-IIGGSIGFDD-YEWGVTLFSD--DALEFKRIVTEMRFDEASA-RY-AE---FGSFFIGNLLLSE----QLSKLF------TI-----------------
21 PsiBlast_CBE 98.93100%-115 - C6 -4WWS Y2113_LISMO E:[7-253] ------VKTLDGWFCLHDFRSIDWAAWR-ELNPGNQ-ELMLNELSHFLSDMEITKN-IGEGEHTIYSILGQK--A--DLVFFTLRDSLEALNEVENR----FNKLAIAD-YLLPTY---SYISVVEL----------SNYLASHMAGGDDPY-QNKGVRARL--YPALP-PKK-HICFYPMSKKRDGADNWYML---PMEERQQLIRD---HGLIGRSYAGKVQQ-IIGGSIGFDD-YEWGVTLFSD--DALEFKRIVTEMRFDEASA-RY-AE---FGSFFIGNLLLSE----QLSKLF------TI-----------------
24 PsiBlast_CBE 97.27100%-122 - C6 -4WWS Y2113_LISMO B:[9-253] --------TLDGWFCLHDFRSIDWAAWR-ELNPGNQ-ELMLNELSHFLSDMEITKN-IGEGEHTIYSILGQK--A--DLVFFTLRDSLEALNEVENR----FNKLAIAD-YLLPTY---SYISVVEL----------S-----------DPY-QNKGVRARL--YPALP-PKK-HICFYPMSKKRDGADNWYML---PMEERQQLIRD---HGLIGRSYAGKVQQ-IIGGSIGFDD-YEWGVTLFSD--DALEFKRIVTEMRFDEASA-RY-AE---FGSFFIGNLLLSE----QLSKLF------TI-----------------
23 PsiBlast_CBE 96.66100%-121 - C6 -4WWS Y2113_LISMO C:[8-253] -------KTLDGWFCLHDFRSIDWAAWR-ELNPGNQ-ELMLNELSHFLSDMEITKN-IGEGEHTIYSILGQK--A--DLVFFTLRDSLEALNEVENR----FNKLAIAD-YLLPTY---SYISVVEL----------S-----------DPY-QNKGVRARL--YPALP-PKK-HICFYPMSKKRDGADNWYML---PMEERQQLIRD---HGLIGRSYAGKVQQ-IIGGSIGFDD-YEWGVTLFSD--DALEFKRIVTEMRFDEASA-RY-AE---FGSFFIGNLLLSE----QLSKLF------TI-----------------
22 PsiBlast_CBE 96.60100%-126 - C6 -4WWS Y2113_LISMO D:[9-253] --------TLDGWFCLHDFRSIDWAAWR-ELNPGNQ-ELMLNELSHFLSDMEITKN-IGEGEHTIYSILGQK--A--DLVFFTLRDSLEALNEVENR----FNKLAIAD-YLLPTY---SYISVVEL----------S----------DDPY-QNKGVRARL--YPALP-PKK-HICFYPMSKKRDGADNWYML---PMEERQQLIRD---HGLIGRSYAGKVQQ-IIGGSIGFDD-YEWGVTLFSD--DALEFKRIVTEMRFDEASA-RY-AE---FGSFFIGNLLLSE----QLSKLF------TI-----------------
28 PsiBlast_CBE 88.6658%-116 - C6 -1T0T Y3416_GEOKA W:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLAS---GSEDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
55 Fugue 88.5059%-118 - C6 -1T0T Y3416_GEOKA V:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLAS---GSEDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
25 PsiBlast_CBE 88.2158%-117 - C6 -1T0T Y3416_GEOKA Z:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLAS---GSEDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
27 PsiBlast_CBE 88.1958%-118 - C6 -1T0T Y3416_GEOKA X:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLAS---GSEDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
1 PsiBlast_PDB 88.1958%-118 - C6 -1T0T Y3416_GEOKA V:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLAS---GSEDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
33 HHSearch 87.3859%-118 - C6 -1T0T Y3416_GEOKA V:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLASGS---EDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
26 PsiBlast_CBE 87.2658%-114 - C6 -1T0T Y3416_GEOKA Y:[6-248] -------QTLDGWYCLHDFRTIDWSAWK-TLPNEER-EAAISEFLALVDQWETTES-EKQGSHAVYTIVGQK--A--DILFMILRPTLDELHEIETA----LNKTKLAD-YLLPAY---SYVSVVEL----------SNYLAS---GSEDPY-QIPEVRRRL--YPILP-KTN-YICFYPMDKRRQGNDNWYML---SMEQRRELMRA---HGMTGRKYAGKVTQ-IITGSVGLDD-FEWGVTLFSD--DALQFKKLVYEMRFDEVSA-RF-GE---FGSFFVGTRLPME----NVSSFF------HV-----------------
2 PsiBlast_PDB 81.9445%-102 - C6 -1VDH - Y1714_THET8 A:[5-249] --VPEPTHTLEGWHVLHDFRLLDFARWF-SAPLEAR-EDAWEELKGLVREWRELEE-AGQGSYGIYQVVGHK--A--DLLFLNLRPGLDPLLEAEAR----LSRSAFAR-YLGRSY---SFYSVVEL----------GS--QEKPLDPESPY-----VKPRL--TPRVP-KSG-YVCFYPMNKRRQGQDNWYML---PAKERASLMKA---HGETGRKYQGEVMQ-VISGAQGLDD-WEWGVDLFSE--DPVQFKKIVYEMRFDEVSA-RY-GE---FGPFFVGKYLDEE----ALRAFL------GL-----------------
34 HHSearch 81.9245%-104 - C6 -1VDH - Y1714_THET8 A:[5-249] --VPEPTHTLEGWHVLHDFRLLDFARWF-SAPLEAR-EDAWEELKGLVREWRELEE-AGQGSYGIYQVVGHK--A--DLLFLNLRPGLDPLLEAEAR----LSRSAFAR-YLGRSY---SFYSVVEL----------GSQEKPLDP----E---SPYVKPRL--TPRVP-KSG-YVCFYPMNKRRQGQDNWYML---PAKERASLMKA---HGETGRKYQGEVMQ-VISGAQGLDD-WEWGVDLFSE--DPVQFKKIVYEMRFDEVSA-RY-GE---FGPFFVGKYLDEE----ALRAFL------GL-----------------
36 HHSearch 64.0217% -80 * C6 *3NN1 ? A:[6-240] ---REKLLTESGVYGTFATFQMDHD-WW-DLPGESR-VISVAEVKGLVEQWS------GKILVESYLLRGLS--DHADLMFRVHARTLSDTQQFLSA----FMGTRLGR-HLTSGG---LLHGVSKK----------PTYVAGFPE----------SMKTELQVNGESG-SRP-YAIVIPIKK----DAEWWAL---DQEARTALMQE---HTQAALPYLKTVKR-KLYHSTGLDD-VDFITYFETE--RLEDFHNLVRALQQVKEFR-HN-RRF--GHPTLLGTMSPLD----EILEKF------A------------------
37 HHSearch 61.2917% -84 - C6 -3DTZ ? A:[22-243] ----------TEIYTSVLSYRLLEG-KA-YSDADTR-S--LDRMMRSIDEFF--SANPGYINFHIYRSYRTD--S--DVIFWYSSRNPDLMILAKER----VQAS-MRP-IAVSSF---SSISIYDE----------SPYNAMN-----------KKLEDS----LRLP-PLR-YFVAYPMSK----TPDWYLL---DFDTRKEIMHE---HIKM------GIRS-YTTYSFGIGD-QEFVVLYEIP--DIAAWSRVTEKLREARARK-WI-IK---ETPILLGRLVDAG----DIAGFL-------------------------
56 Fugue 57.4216% -63 - C6 -2VXH ? A:[11-251] KIERGTILTQPGVFGVFTMFKLR-PDWN-KVPAMER-KGAAEEVKKLIEKHK------DNVLVDLYLTRGLETNS--DFFFRINAYDLAKAQTFMRE----FRSTTIGK-NADVFE---TLVGVTKP----------LNYISK----DKSPG-LNAGLSSAT--YSG-P-APR-YVIVIPVKKN----AEWWNM---SPEERLKEMEV---HTTPTLAYLVNVKR-KLYHSTGLDD-TDFITYFETD--DLTAFNNLMLSLAQTTLGT-IH----------------SPE----DVIKAL------AD-----------------
44 HHSearch 43.1412% -69 - C6 -3NN1 ? A:[136-212] ------------YAIVIPIKK-DAE-WW-ALDQEAR-TALMQEHTQAALPY------LKTVKRKLYHSTGLD--DV-DFITYFETERLEDFHNLVRA----LQQVK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
61 Fugue 41.1318% -31 - C3 -2OGX MOSA_AZOVD A:[31-276] --GKRPIRLLP------WLQVVKIGGRVMDRGADAI-LPLVEELRKLLPEHRLLIL-TGAGVRARHVFSVGL--D-----LGLPVGSLAPLAASEAG----QNGHILAAMLASEGV---SYVEHPTV----------ADQLAIHLSAT----------RAVV--GSAFP-PYH-HHEFPGSRIPPHRADTGAFL---LADAF----------GAAGLTIVENVDG-IYTADPNGPD-RGQARFLPET--SATDLAKSEGPLPVDRALL-DVMATARHIERVQVVNGLVPG----RLTAALRGEHVGTLIRTGVRPA---------
60 Fugue 40.1921% -53 - C5 -3G8Q CDAT8_METKA A:[1-278] -----MKVSLAG-------QTVDVKKIL-NEIPKRTVTAALLEGGEIVAVEE--AD-DEHAERKLVRRHDVE--G--KVVFVTARPCLYCARELAEAGVAGVVYLGRGR-GLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARV--YCLLT-GRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEE---LPVF------RIRRFLISGEFDRDE-LRERILEDIE--PRI-LDPFAVRARIARAGAFSS-SR---EAEVFIGDVLTSVGREVNLNDPR------TVVTVDVLGPRVSVGVEKR
38 HHSearch 40.0613% -50 - C6 -3QPI ? A:[22-182] ----------------------------------------------------------------------------------VIGESLMAASHLAIA----PSLS--------TPW---QLRGVASH----------ARYVERAEK-----I-ALTSVQA-----GLGRNEAT-RAALIPIRK----SAAWWEM---TQDERRAIFEDKSHHIAASLKYLPAIAR-QLYHCRDIGEPFDFLTWFEYAPEHATMFEDLVGVLRATEEWT-YV-ER---EVDIRLARA---------------------------------------