@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0816: (2016-03-18 )
MIKLCTISDSQALLEVSYKTFDETFRAQNKPENMDAYLKTNFTAKKLSDELKNPHSYFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKKGLGKELFNQAIEIAKEVDAKKIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQTDIIMIKDL

Atome Classification :

(20 SA) ----------------------------------------------------------------------------------------------------------------------------------------------------.........10....-....20...-...-----.------.---30........40........50...---..----...60..-...--...70........80------------------------........90........100.......110.......120-...-.....130.......140.......150.---.---.....160......-----
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------------------------------------------------------------------------------MIKLCTISDSQALLE-VSYKTFDET-FRA-----Q------N---KPENMDAYLKTNFTAKKLSDELKNP---HS----YFYFVFH-QEA--IAGYLKLNIGDAQTE------------------------EIAGNTIEIERIYVLKSFQKKGLGKELFNQAIEIAKEVD-A-KKI-WLGVWEKNKNAIQFYAKLGFIKNGQHDFF---M---GDDCQTDIIMIKDL-----
63 HHSearch 96.6154%-114 * C2 *1TIQ PAIA_BACSU A:[4-170] ----------------------------------------------------------------------------------------------------------------------------------------------------KMKKCSREDLQTLQQ-LSIETFNDT-FKE-----Q------N---SPENMKAYLESAFNTEQLEKELSNM---SS----QFFFIYF-DHE--IAGYVKVNIDDAQSE------------------------EMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERN-K-KNI-WLGVWEKNENAIAFYKKMGFVQTGAHSFY---M---GDEEQTDLIMAKT------
1 PsiBlast_PDB 95.7553%-110 - C2 -1TIQ PAIA_BACSU A:[6-171] ------------------------------------------------------------------------------------------------------------------------------------------------------KKCSREDLQTLQQ-LSIETFNDT-FKE-----Q------N---SPENMKAYLESAFNTEQLEKELSNM---SS----QFFFIYF-DHE--IAGYVKVNIDDAQSE------------------------EMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERN-K-KNI-WLGVWEKNENAIAFYKKMGFVQTGAHSFY---M---GDEEQTDLIMAKTL-----
2 PsiBlast_PDB 80.4239%-108 * C1 *4E2A - ? A:[46-206] ------------------------------------------------------------------------------------------------------------------------------------------------------------DELSLLQKIAIQTFRET-FAF-----D------N---TAEQLQNFFDEAYTLSVLKLELDDK---ES----ETYFILM-SGK--AAGFLKVNWGSSQTE------------------------QVLEDAFEIQRLYILKAYQGLGLGKQLFEFALERAQISG-L-SWV-WLGVWEKNVKAQLLYAKYGFEQFSKHSFF---V---GNKVDTDWLLKKSL-----
4 PsiBlast_PDB 72.9924% -85 - C2 -1WK4 ? A:[3-169] -----------------------------------------------------------------------------------------------------------------------------------------------------IRRAGLEDLPGVAR-VLVDTWRAT-YRG-----V------V----PEAFLEGLSYEGQAERWAQRLKTPT--WP----GRLFVAE-SESGEVVGFAAF--GPDRAS------------------------GFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEG-Y-GRM-LVWVLKENPKGRGFYEHLGGVLLGEREIE---L---GGAKLWEVAYGFDL-----
69 HHSearch 72.1616%-116 - C2 -1GHE TTR_PSEAJ A:[5-173] ----------------------------------------------------------------------------------------------------------------------------------------------------QLRRVTAESFAHYRH-GLAQLLFET-VHGGASVGFMAD---L---DMQQAYAWCD------GLKADIAAG---SL----LLWVVAE-DDN--VLASAQLSLCQKPN---------------------------GLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHK-R-GLL-HLDTE-AGSVAEAFYSALAYTRVGELPGY---CATPDGRLHPTAIYFKTL-----
5 PsiBlast_PDB 72.0524% -86 - C2 -2CY2 ? A:[3-169] -----------------------------------------------------------------------------------------------------------------------------------------------------IRRAGLEDLPGVAR-VLVDTWRAT-YRG-----V------V----PEAFLEGLSYEGQAERWAQRLKTPT--WP----GRLFVAE-SESGEVVGFAAF--GPDRAS------------------------GFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEG-Y-GRM-LVWVLKENPKGRGFYEHLGGVLLGEREIE---L---GGAKLWEVAYGFDL-----
6 PsiBlast_PDB 69.1324%-123 - C1 -3FIX PAIA_THEAC A:[29-167] -----------------------------------------------------------------------------------------------------------------------------------------------------IRKLSIEDLETLIE-VARESWKWT-YAG-----I------Y---SEEYIESWIREKYSKEKLLNEIVRS---QSNLDILFLGAFA-DST--LIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKG-I-LEC-RLYVHRQNSVGFSFYYKNGF-----------------------------------
7 PsiBlast_PDB 68.5624%-126 - C1 -3NE7 PAIA_THEAC A:[5-143] -----------------------------------------------------------------------------------------------------------------------------------------------------IRKLSIEDLETLIE-VARESWKWT-YAG-----I------Y---SEEYIESWIREKYSKEKLLNEIVRS---QSNLDILFLGAFA-DST--LIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKG-I-LEC-RLYVHRQNSVGFSFYYKNGF-----------------------------------
9 PsiBlast_PDB 68.5424%-126 - C1 -3F0A PAIA_THEAC A:[8-146] -----------------------------------------------------------------------------------------------------------------------------------------------------IRKLSIEDLETLIE-VARESWKWT-YAG-----I------Y---SEEYIESWIREKYSKEKLLNEIVRS---QSNLDILFLGAFA-DST--LIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKG-I-LEC-RLYVHRQNSVGFSFYYKNGF-----------------------------------
8 PsiBlast_PDB 67.8124%-134 - C1 -3K9U PAIA_THEAC A:[5-143] -----------------------------------------------------------------------------------------------------------------------------------------------------IRKLSIEDLETLIE-VARESWKWT-YAG-----I------Y---SEEYIESWIREKYSKEKLLNEIVRS---QSNLDILFLGAFA-DST--LIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKG-I-LEC-RLYVHRQNSVGFSFYYKNGF-----------------------------------
66 HHSearch 66.8221% -86 - C2 -2CY2 ? A:[2-167] ----------------------------------------------------------------------------------------------------------------------------------------------------RIRRAGLEDLPGVAR-VLVDTWRAT-YRG-----V------V---PEAFLEGL-SYEGQAERWAQRLKTPTW-PG----RLFVAESESGE--VVGFAAFGPDRASGF--------------------------PGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEG-Y-GRM-LVWVLKENPKGRGFYEHLGGVLLGEREIE---L---GGAKLWEVAYGF-------
64 HHSearch 66.6719%-112 - C2 -2DXQ ? A:[7-144] ----------------------------------------------------------------------------------------------------------------------------------------------------SLRAAGPGDLPGLLE-LYQVLNPSD-P-------E------L---TTQEAG---------AVFAAMLAQP---GL----TIFVATE-NGK--PVATATLLIVPNLTR------------------------A-ARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGAN-C-YKV-MLLTGRHDPAVHAFYESCGFVQNKTG-----------------------------
83 HHSearch 66.4122%-112 - C2 -2I79 ? A:[6-170] ----------------------------------------------------------------------------------------------------------------------------------------------------LIREAEPKDAAELVA-FLNRVSLETDFTS-----LDGDGILL---TSEEMEIFL---------NKQASSD---NQ----ITLLAFL-NGK--IAGIVNITADQRKR---------------------------VRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQASGIL-RRL-QLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIE---EGKFIDVYLMGKL------
86 Fugue 65.7619%-101 - C2 -1P0H MSHD_MYCTU A:[6-313] ALDWRSALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVRELIQMRRPLRDIPEPTIPDGVVIRTYAGTSDDAELLR-VNNAAFAGH-PE--------------------------QGGWTAVQLAERRGEAWFDPD----GLILAFG-DGR--LLGFHWTKVHPDHP-----------------------------GLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRL-VEPAV-LLYVESDNVAAVRTYQSLGFTTYSVDTAY---A---L------------------
84 Fugue 64.9420% -72 - C2 -2CY2 ? A:[1-174] ---------------------------------------------------------------------------------------------------------------------------------------------------VRIRRAGLEDLPGVAR-VLVDTWRAT-YRG-----V------V---PEAFLEGLSYEGQAERWAQRLKTPT---WP----GRLFVAE-SES--GEVVGFAAFGPDRAS------------------------GFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEG---YGRMLVWVLKENPKGRGFYEHLGGVLLGEREIE---L---GGAKLWEVAYGFDLGGHKW
71 HHSearch 63.9421%-104 - C2 -1Z4E - ? A:[6-149] ----------------------------------------------------------------------------------------------------------------------------------------------------TIREATEGDLEQMVH-MLADDVLGR-KRE-----R------Y---EKPLPVSYV------RAFKEIKKDK---NN----ELIVACN-GEE--IVGMLQVTFTPYLTY------------------------Q-GSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERG-C-HLI-QLTTDKQRPDALRFYEQLGFKASHEGL----------------------------
80 HHSearch 63.0019%-117 - C2 -2AE6 ? A:[9-162] ----------------------------------------------------------------------------------------------------------------------------------------------------TIRLVAEADWPALHA-LDQII-------------------------------------SLAAYQEKMKD-----E----TIFVAIS-GQQ--LAGFIEVHPPTSLA---------------------------AHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISG-I-HKL-SLRVMATNQEAIRFYEKHGFVQEAHFKEEFY-I---NGHYCDDYQYAY-------
87 Fugue 62.5016%-111 - C2 -2FIA - ? A:[1-157] ---------------------------------------------------------------------------------------------------------------------------------------------------MKIRVADEKELPMILQ-FLTEVKAYM-DVV-------------------GITQWTKDYPSQGDIQEDITK-----K----RLYLLVH-EEM--IFSMATFCMEQEQ------------------------------DFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEG-R-RKM-YAQTNHTNHRMIRFFESKGFTKIHESLQM---N---RLDFGSFYLYVKELE----
65 HHSearch 62.1620%-109 - C2 -3FNC ? A:[7-148] ----------------------------------------------------------------------------------------------------------------------------------------------------HIRKATNSDAEAIQH-VATTSWHHT-YQD-----L------I---PSDVQDDFLKRFYNVETLHNRI--S---AT----PFAVLEQ-ADK--VIGFANFIELE-------------------------------KGKSELAAFYLLPEVTQRGLGTELLEVGMTLFHV---P-LPM-FVNVEKGNETAIHFYKAKGFVQVEEFTED--------------------------
68 HHSearch 61.8920% -92 - C2 -1U6M ? A:[3-177] ----------------------------------------------------------------------------------------------------------------------------------------------------LIRSATKEDGQAIAR-LVLVILKDM-ELP-----I------LEEVSEEQMIDLLAEATAY----PTYRYG---YQ----RILVYEH-AGE--VAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASG-K-QAL-GLNVDFDNPGARKLYASKGFKDVTTMTI---------------------------