@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA0677: (2016-01-14 )
MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVLDDVSRFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......-.-..10........20......-----..----30....-------------....40........--------------50..------......60........70.....-....80-------......-...90........100--.--....---.-.110--..-------------.......120----.-........130-........140-.--------..-.....--150------......----.----160--.------..--...-..170---........180-...--------.....190.......200....-----...210.--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSG
Y
A
E
-
R
-
A
T
T
R
R
RQA
G
F
T
L
I
E
V
M
V
A
I
M
-----
L
M
----
A
I
V
S
L
M
-------------
A
W
R
G
L
D
S
I
A
R
A
S
AH--------------LEDS------
T
E
Q
G
A
A
L
L
R
A
L
N
Q
L
E
R
D
-
I
A
L
H
S
-
A
I
R
E
E--------TGLPSG-DEPIRAGDSLP
P
G
L
A
L
--
K
--
R
L
S
E---I-
P
L
----
R
L
-------------
D
I
V
RASTE------P-GA
P
L
Q
R
V
R
W
W
--
R
QG
K
V
L
Y
R
AA--S--------PS-GDRLP--L
P
P
------
L
A
E
R
V
A
----
V
----
L
D
---D------VS--RF
D
-
I
R
A
W----VPGKGWTRLP--ARS--------KVRASG
L
E
I
S
L
A
R
V
T
R
N
G
V
E
R
Y
-----
R
R
V
VALQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
88.44
23%
-41
- C6 -
3NJE
-
GSPJ_PSEAE
A:
[35-193]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
Q
------
E
Q
R
M
R
E
L
V
R
A
M
G
A
L
E
R
D
-
L
T
Q
A
V
-
E
R
P
V
R
--------
D
E
--
L
G
-
D
-------
N
R
G
----------
A
F
L
S
E
G
E
N
-
D
Q
----
I
V
-------------
E
F
T
R
G
G
W
------------
L
Q
R
V
R
W
S
--
L
S
G
E
T
L
E
R
R
Y
--
W
--------
L
V
-
L
D
R
A
Q
--
D
-
S
------
K
P
R
V
Q
Q
----
V
----
L
D
---
G
------
V
T
--
A
L
S
-
W
R
F
L
----
D
K
E
H
N
W
Q
G
H
W
--
P
T
D
EGS
E
E
E
R
L
E
S
L
P
L
A
V
E
M
T
L
E
H
R
H
-
Y
G
--
K
L
-----
V
R
V
W
R
L
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
Fugue
77.20
20%
-28
- C5 -
3GN6
6
?
A:
[22-321]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNPWT
D
A
A
L
D
T
IVNQA
L
T
L
Y
A
E
M
R
-
V
V
P
A
H
H
D
A
F
L
A
A
I
D
T
V
S
A
K
L
R
V
LPG
F
L
----
S
L
A
L
K
Q
MSGDSTMVKNYPE
T
Y
K
G
V
L
A
T
A
Y
L
D
G
V
A
A
GTQ
P
Y
F
Y
N
L
F
V
R
F
A
D
G
------
R
A
A
R
A
A
G
F
E
A
L
F
E
T
H
I
H
-
P
L
L
H
A
M
A
D
G
P
E
L
L
A
Y
R
A
V
L
Q
S
V
V
A
G
-
D
R
H
A
I
Y
R
G
A
E
E
I
R
S
F
L
--
R
--
R
P
V
E
---
L
-
P
E
----
R
--------------
E
T
V
T
V
E
N
H
------
V
M
V
P
E
D
K
H
A
A
W
E
--
P
Q
V
A
I
L
L
Q
V
A
--
Q
D
T
F
E
PQDE
P
S
-
G
V
G
L
P
--
G
A
R
DNR
Y
Y
R
K
A
L
S
T
E
----
I
----
L
R
---
N
AHADGG
L
R
--
A
Y
I
M
H
G
V
W
----
E
S
V
W
D
H
E
N
S
H
--
L
D
P
--------
R
F
L
A
A
A
G
P
V
G
-
A
A
A
V
V
G
P
V
E
P
F
-----
Y
L
T
R
R
L
V
V
A
D-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
76.12
20%
-44
- C3 -
4NUZ
1
?
A:
[1-892]
MKIPEKIPMKPLHGP
L
Y
G
G
Y
F
R
TWHDKTSDPTEKDKVNSMGELPKEVD
L
A
F
I
F
H
D
WTKDY
S
L
F
W
K
E
L
A
T
K
H
V
P
K
L
N
K
Q
G
T
R
V
I
R
T
I
P
W
R
F
L
A
GGDNSGIAEDTSKYPNT
P
E
G
N
K
A
L
A
K
A
I
V
D
E
YVYKYNLD
G
L
D
V
Q
VEHDS
I
P
K
V
DKKED
T
A
G
V
E
R
S
I
Q
V
F
E
E
I
G
K
L
IGPKGVDKS
R
L
F
I
M
D
S
TYMADKNPLIERGAPYIN
L
L
L
V
Q
VYGSQGEKGGWEPVSNRPEKT
M
E
E
R
W
Q
G
Y
SKYIRPEQ
Y
M
I
G
F
S
F
YEENAQEGNLWYDINSRKDEDKANGINTDITGT
R
A
E
R
Y
A
R
WQPKTGGVKG
G
I
F
S
Y
AIDRDGVAHQ
P
K
K
Y
A
K
-
K
D
A
T
D
N
I
F
H
S
D
Y
S
V
S
K
A
L
K
T
V
M
-----
L
K
D---
K
S
Y
D
L
I
-------------
D
E
K
D
F
P
D
K
A
L
R
E
A
V
--------------
M
A
Q
V
------
G
T
R
K
G
D
L
E
R
F
N
G
T
L
R
L
D
---------------------------
N
P
A
I
Q
---
S
L
E
G
L
N
K
F
--
K
--
K
L
A
Q
---
L
-
D
L
IGLS
R
I
-------------
T
K
L
D
R
S
V
L
------
P
--
A
N
M
K
P
G
K
D
T
--
L
E
T
V
L
E
T
Y
K
K
--
D
--------
N
K
-
E
E
P
A
T
--
I
P
P
------
V
S
L
K
V
S
----
G
----
L
T
---
G
------
L
K
--
E
L
D
-
L
S
G
F
DRET
L
A
G
L
D
A
A
T
L
T
--
S
L
E
--------
K
V
D
I
S
G
N
K
L
D
L
A
P
----
G
T
E
N
R
-----
Q
I
F
D
T
M
L
S
T
I
S
N
H
VGSNEQT
V
K
F
D
KQK
P
T
G
H
Y
P
DTYGKT
S
L
R
L
P
VANEKVDLQSQ
L
L
F
G
T
V
T
NQGTLINS
E
A
D
Y
K
A
Y
Q
N
HKIAGRSFVDSNYHYNNFKVSYEN
Y
T
V
K
V
T
D
STLGTTTDKTLATDKE
E
T
Y
K
V
D
F
F
S
PADKTKAV
H
T
A
K
V
I
V
G
DEKTMMVNLAEG
A
T
V
I
G
GSAD
P
V
N
A
R
K
V
F
DGQLGSETDNISLGWDS
K
Q
S
I
I
F
K
L
KEDGLIK
H
W
R
F
F
N
DSARNPETTNKPIQ
E
A
S
L
Q
I
F
NIKDYN
L
D
N
L
L
E
NPNKFDDEKYWITV
D
T
Y
S
A
QGERAT
A
F
S
N
T
L
N
NITSK
Y
W
R
V
V
F
D
TKGDRYSSPVVP
E
L
Q
I
L
G
Y
PLPN
A
D
T
I
M
K
T
V
T
T
A
K
E
L
S
Q
QKDKFS
Q
K
M
L
D
E
L
K
I
K
E
M
A
L
E
T
S
L
N
SKIFD
V
T
A
I
N
A
N
A
G
V
L
K
D
C
I
EK
31
Fugue
74.94
20%
-63
- C2 -
4QFR
4
AAKG1_RAT
C:
[28-322]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y
T
T
F
M
K
S
HRCYDLIPT
S
S
K
L
V
V
F
D
TSLQ
V
K
K
A
F
F
A
L
V
T
N
G
V
R
A
A
P
L
-
W
-
D
S
K
K
Q
S
F
V
G
M
L
T
I
T
D
F
I
N
I
L
-----
H
R
Y
YKS
A
L
V
Q
I
Y
-------------
E
L
E
E
H
K
I
E
T
W
R
E
V
Y
--------------
L
Q
D
S
F
K
P
L
V
C
I
S
P
N
A
S
L
F
D
A
V
S
S
L
I
R
N
K
I
H
R
L
P
-
V
I
D
P
E
--------
S
G
---------
N
T
L
Y
I
L
T
H
K
R
I
L
--
K
--
F
L
K
L
---
F
-
I
T
----
S
L
-------------
E
E
L
Q
I
G
T
Y
------
A
-
N
I
A
M
-----
V
--
R
T
T
T
P
V
Y
V
A
L
--
G
--------
I
F
-
V
Q
H
R
V
S
A
L
P
V
------
V
D
E
K
G
R
----
V
----
V
D
---
I
------
Y
S
--
K
F
D
-
V
I
N
L
----
A
A
E
K
T
Y
N
N
L
D
VS
V
T
K
--------
A
L
Q
H
R
V
L
K
C
Y
L
H
E
T
L
E
A
I
I
N
R
L
V
E
A
EV
H
R
L
V
V
V
D
EHDVVK
G
I
V
S
L
S
D
I
L
Q
A
L
V-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
74.37
16%
-51
- C6 -
2RET
1
?
B:
[9-167]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
--------------
S
Q
E
R
------
T
A
R
L
N
E
L
Q
R
A
L
V
M
M
D
S
D
-
F
R
Q
I
A
-
L
R
Q
T
R
--------
T
---------------
S
K
-
K
L
L
H
W
A
D
Y-
L
L
D
S
---
D
-
N
K
----
G
I
-------------
M
F
A
R
L
G
W
H
NPQQQF
P
-
R
G
E
V
T
K
V
G
Y
R
--
I
K
D
E
R
L
E
R
V
W
--
W
--------
R
Y
-
P
D
T
P
-----
Q
------
E
G
V
V
T
P
----
L
----
L
S
---
D
------
V
E
--
E
L
N
-
V
R
F
Y
----
D
G
-
K
Q
W
I
N
E
W
--
S
N
E
--------
L
T
L
P
A
A
I
S
V
E
L
T
L
K
D
-
Y
G
--
K
I
-----
A
R
T
Y
L
T
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
73.36
32%
-1
* C7 *
2HCS
-
A:
[325-395]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
V
E
K
L
T
K
------
G
-
K
G
P
--
K
V
R
T
W
L
S
E
N
G
E
E
R
L
S
R
M
--
A
--------
V
S
-
G
D
D
C
V
--
V
K
P
------
L
D
D
R
F
A
----
T
SL
H
F
L
N
---
A
------
M
S
KV
R
K
D
-
I
Q
E
W
----
K
P
S
T
G
W
Y
D
W
Q
--
Q
V
P
--------
F
C
S
N
H
F
T
E
L
I
M
K
D
G
R
T
L
V
T
P
C
R
-----
G
Q
D
E
L
V
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
71.52
32%
-1
- C7 -
2HCN
1
A:
[325-395]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
V
E
K
L
T
K
------
G
-
K
G
P
--
K
V
R
T
W
L
S
E
N
G
E
E
R
L
S
R
M
--
A
--------
V
S
-
G
D
D
C
V
--
V
K
P
------
L
D
D
R
F
A
----
T
SL
H
F
L
N
---
A
------
M
S
KV
R
K
D
-
I
Q
E
W
----
K
P
S
T
G
W
Y
D
W
Q
--
Q
V
P
--------
F
C
S
N
H
F
T
E
L
I
M
K
D
G
R
T
L
V
T
P
C
R
-----
G
Q
D
E
L
V
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
70.24
14%
-55
- C6 -
3CI0
1
?
J:
[10-159]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
K
L
N
L
M
Q
Q
T
M
S
F
L
T
H
D
-
L
T
Q
M
M
-
P
R
P
V
R
--------
G
D
--
Q
G
-
Q
-------
R
E
P
A
-
L
L
A
--
G
AG
V
L
A
S
---
E
-
S
E
----
G
M
-------------
R
F
V
R
G
G
V
V
NPLMRL
P
-
R
S
N
L
L
T
V
G
Y
R
--
I
H
D
G
Y
L
E
R
L
A
--
W
--------
P
L
-
T
D
A
A
G
--
S
-
V
------
K
P
T
M
Q
K
----
L
----
I
P
----------
A
D
--
S
L
R
-
L
Q
F
Y
----
D
G
-
T
R
W
Q
E
S
W
--
S
S
V
--------
Q
A
I
P
V
A
V
R
M
T
L
H
S
P
Q
-
W
G
--
E
I
-----
E
R
I
W
L
L
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
62.20
22%
-35
- C4 -
2HEQ
-
YORP_BACSU
A:
[1-84]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
G
D
P
L
--
P
--
K
Y
W
S
---
Y
-
P
V
----
G
L
-------------
A
V
E
I
N
N
N
A
------
R
-
Y
G
C
P
H
H
V
G
----
R
K
G
K
I
I
E
H
L
H
--
S
--------
A
T
-
Y
D
------------------
Y
A
----
V
----
S
D
ETG
D
------
I
T
--
Y
F
K
-
E
H
E
L
----
T
P
L
K
G
G
L
A
Y
V
--
L
E
H
--------
H
H
H
H
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
61.74
40%
36
- C7 -
2J7U
1
A:
[396-435]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
61.05
40%
45
- C7 -
2J7W
-
A:
[396-435]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
58.81
31%
-1
- C7 -
4V0R
3
?
A:
[638-697]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
I
T
Q
W
--
L
E
T
K
G
V
E
R
L
K
R
M
A
--------
I
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
58.03
40%
9
- C7 -
4HHJ
-
?
A:
[396-435]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
57.88
31%
2
- C7 -
4V0Q
1
?
A:
[638-697]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
I
T
Q
W
--
L
E
T
K
G
V
E
R
L
K
R
M
A
--------
I
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
57.64
17%
-49
- C5 -
4EW5
1
?
A:
[1-102]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
--------------
R
K
N
G
------
G
K
P
D
H
V
E
S
D
I
S
Y
A
V
A
R
Q
-
L
A
V
N
L
-
G
L
T
G
Y
--------
Q
S
L
P
P
G
I
A
K
N
L
A
R
G
K
P
L
P
P
G
I
A
K
--
K
--
T
V
P
A
---
S
M
L
G
----
Q
L
PYYPG
Y
E
W
K
I
V
GD
N
L
V
L
I
A
L
S
------
T
-
A
V
V
T
A
I
I
N
G
V
--
F
D
L
E
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
55.88
40%
40
- C7 -
3VWS
-
?
A:
[396-435]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
55.22
32%
-1
- C7 -
2HFZ
1
A:
[369-439]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
V
E
K
L
T
K
------
G
-
K
G
P
--
K
V
R
T
W
L
S
E
N
G
E
E
R
L
S
R
M
--
A
--------
V
S
-
G
D
D
C
V
--
V
K
P
------
L
D
D
R
F
A
----
T
SL
H
F
L
N
---
A
------
M
S
KV
R
K
D
-
I
Q
E
W
----
K
P
S
T
G
W
Y
D
W
Q
--
Q
V
P
--------
F
C
S
N
H
F
T
E
L
I
M
K
D
G
R
T
L
V
T
P
C
R
-----
G
Q
D
E
L
V
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
Fugue
54.16
9%
-23
* C5 *
2FZ0
-
NYV1_YEAST
A:
[1-149]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
R
F
N
V
S
Y
V
E
V
I
K
--------------------------------------
N
G
E
T
I
S
S
C
F
--------------
Q
P
F
Q
------
K
N
E
N
Y
G
T
I
T
S
A
N
E
Q
I
T
P
-
V
I
F
H
N
-
L
I
M
D
M
--------
V
---------
L
P
K
V
V
P
I
K
G
N
K
V
T
--
K
--
M
S
M
N
---
L
-
I
D
----
G
F
-------------
D
C
F
Y
S
T
D
D
------
H
-
D
P
------------
K
T
V
Y
V
C
F
T
--
L
--------
V
D
I
P
K
I
L
P
--
I
R
I
------
L
S
G
L
--------------------------------
Q
E
Y
----
E
S
N
A
T
N
E
L
L
S
--
S
H
V
--------
G
Q
I
L
D
S
F
H
E
E
L
V
E
Y
R
N
Q
T
L
N
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
53.54
40%
45
- C7 -
4C11
-
?
B:
[399-438]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
D
D
C
V
--
V
K
P
------
I
D
D
R
F
A
NAL
L
A
----
L
N
---
D
------
M
G
KV
R
K
D
-
I
P
Q
W
----
Q
P
S
K
G
W
H
D
W
Q
--
Q
V
P
--------
F
C
S
H
H
F
H
E
L
I
M
K
D
G
R
K
L
V
V
P
C
R
-----
P
Q
D
E
L
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
45.29
22%
-12
- C5 -
1DU2
-
HOLE_ECOLI
A:
[1-76]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
K
N
L
--------
A
K
L
D
Q
T
-
E
M
D
K
V
N
V
D
L
A
A
A
G
V
A
F
--
K
--
E
R
Y
N
---
M
-
P
V
----
I
A
-------------
E
A
V
E
R
E
Q
-----------
P
E
H
L
R
S
W
F
--
R
E
R
L
I
A
H
R
L
A
--
S
--------
V
N
-
L
S
R
L
P
--
Y
E
P
------
K
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------