@TOME V2.3
(Nov 2016)

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA3089: (2016-02-13 )
MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRHPLAASRWRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEHLCRHQLPLAATREGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLRGRWLRQRDWPAYLASLAGPQTGQHWLHLSREHWLAPAMRRQDPLDPPRDGACWNIAFADEARPQMLVRVVPRDGYWVEAERLFLASDDWPPGLSLWGSARQAADA

Atome Classification :

(20 SA) -------------------------------.........10..--------..-----....20....-----....30.----..--..----..-.40....-----....50........60........70----------------------........80........90---------------....----.--...100...--..---..110.......120-.......130.....---..140......-.150..-.....160----.....-...170.------.-......180.......190.-.......200-.-........210....-.-..220.......230-.........240-----...--------...--..250......----.------260.......270-------.......--------..280.-----------...--..---.290-------------.....------....300-...-----....310.......320----------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------MTLLTELLDELRH--------PA-----VRDLAWTLLA-----PPLLRRT----PE--PQ----RH-PLAASRW-----RQEPERLAAWLREQERQPQHLAAWLA----------------------QWPRQRLGLYYEHLWQFALE---------------QAPD----V--RLIAANLPV--RD---GGHTLGELDLLLRDD-DGIHHLELAIKLYLG---PQSGPGDWLGP-GGQDRL-SRKLEHL-----CRHQL-PLAAT-R------E-GRQVLAAHGAESAVSALW-L-SGYLFHPW---P-GPGSLPADIEPRHLR-G-RWLRQRDWPAYLA---SLAGPQTGQHW------LHL--------SRE--HWLAPAMRRQD----P------LDPPRDGACWN---------IAFADEA--------RPQMLV-----------RVV--PR---DG---------------YWVEA------ERLFLAS-DDW-----PPGLSLWGSARQAADA-----------------------------------------------------
34 Fugue 85.2420% -48 * C5 *4USR ? A:[1-357] -------------------------------GPAMPPILDVI-----------V-----IGGGQAALTT-----AYFLRRT----SL--SYLLLDEQ-PGPGGAW-----LHAWDSLRLFSPAAWSS---IAGWPM----------------------PSPTEPGNPTRNDVIDYLRR---------------YEDR----Y--QFPIQRPVR--VD---TVTRLDDLWRVQAGD---QQWLARAVISATG---TWSKP--FIPPYEGRELF-QGAQIHS-----AHYRT-P--AP-F------A-GKRVMVVGGGNSGAQVLAEL-SSVSETLWITQE-PPAFLPDEVDGRVLF-E-RATARWKAQQEGR---SIDEPAGGFGDIVMVPPVRE--------ARE--RGVLVAERPFA----R------FTE--TGVEWADGRRENLDAVIWCSGF--------RPALDHLRELGVVEADGKVQ--VE---DT---------------RVVKQ------PNLWLVGYGDWTGMASATLIGVTRTARSTADQVVQALTATP--------------------------------------------
27 Fugue 74.5819% -40 * C2 *3JA7 - ? A:[1-447] --------------------------------NWISELIDTYRNLMNNYEVDNA-----VSEIVSDAIVYEDDTEVVALNL----DK--SK----FS-PKIKNMM-----LDEFSDVLNHLSFQRKGSDHFRRWYVDSRIFFHKIIDPKRPKEGIKELRRLDPRQVQYVYFIYDTAHESYACDGRMYEAGTKIKIPK----A--AVVYAHSGL--VDCC-GKNIIGYLHRAVKPA-NQLKLLEDAVVIYRI---TRAPDRRVWYV-DTGNMP-ARKAAEH-----MQHVM-NTMKN-RVVYDAST-GKIKNQQHNM-SMTEDYW-L-QRRDGKAV---T-EVDTLPGADNTGNMEDI-RWFRQALYMALRV---PLSRIPQDQQG------GVMFDSGTSITRDE--LTFAKFIRELQ----HKFEEVFLDPLKTNLLLKG--------IITEDEW--------NDEINN-----------IKIEFHR---DS---------------YFAELKEAEILERRINML-TMA-----EPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEESKEARFQD--------------------------
28 Fugue 70.6017% -46 - C1 -1TRE - TPIS_ECOLI A:[3-257] ------------------------------------------------------------------------------------------M----RH-PLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIA----------------------P-----PEMYIDMAKREAE-----------------GSH----I--MLGAQNVNL--NL---SGAFTGETSAAMLKD-IGAQ------YIIIG---HSERRTYH--K-ESDELI-AKKFAVL-----KEQGLTPVLCI-G------E-TEAENEAGKTEEVCARQI-D-AVLKTQGA---A-AFEGAVIAYEPVWAI-G-----------------------TGKSA------TPA--------QAQ--AVHKFIRDHIA----K------V-DANIAEQVI---------IQYGGSV--------NASNAA-----------ELF--AQPDIDG---------------ALVG-----------GAS-LKA-----DAFAVIVKAAEAAKQA-----------------------------------------------------
35 Fugue 68.8111% -54 - C5 -3S5W PVDA_PSEAE A:[29-448] ---------------VVHDLIGVGFGPSNIALAIALQERAQAQG--------ALEVLFLDKQGDYRWHG-----NTLVSQS----ELQISF----LK-DLVSLRN-----PTSPYSFVNYLHKHDRLVDFINLGTF----------------------YPCRMEFNDYLRWVAS-HFQ---------------EQSR----Y--GEEVLRIEP--ML---SAGQVEALRVISRNA-DGEELVRTTRALVVS---P-----------GGTPRI-PQVFRALKGDGRVFHHS-QYLEH-M------A-KPMKIAIIGGGQSAAEAF-I-DLNDSYP---------SVQADMI---LR-A-SALKPADDSPFVN---EVFAPKFTDLI------YSR--------EHA--ERERLLREYHNTNYSV------VDTDLIERIYG---------VFYRQKVSGIPRHAFRCMTTV-----------ERA--TA---TAQGIELALRDAGSGELSVETY------DAVILAT-GYE-----RQLRQLLEPLAEYLGEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHLK
31 Fugue 63.6314% -57 - C1 -3THI THI1_PANTH A:[1-362] ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSA--------DP-----PDDLDVFVLD-----SIFLSHF----VD--AG----YLLPFGSQDI-----DQAEDVLPFALQGAKRNGEVYG--LP----------------------QILCTNLLFYRKG--DLKIG---------------QVDN----I--YELYKKIGTSHSE---QIPPPQNKGLLINMA-GGTTKASMYLEALID---VTGQYTEYDLL-PPLDPL-NDKVIRG-----LRLLI-NMAGE-K------P-SQYVPEDGDAYVRASWFA-QGSGRAFIGY---SESMMRMGDYAEQVRFK-PISSSAGQDIPLFYS---DVVSVNSKTAH------PEL--------AKKLANVMASADTVEQ----A------LRPQADGQYPQ---------YLLP--A--------RHQVYE-----------ALM--QD---YP---------------IYSEL------AQIVNKP-SNRVFRLGPEVRTWLKDAKQVLPEALG--------------------------------------------------
5 PsiBlast_PDB 54.3436% -19 - C4 -3CZL - ? A:[8-78] --------------------------------------------------------------------------PPALRAAFAGPLD--PQ----HA-EVLLSRY-----DQHASRLLDALHALYGQRADYASWLA----------------------QW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 53.9036% -15 - C4 -3CZK - ? A:[8-74] --------------------------------------------------------------------------PPALRAAFAGPLD--PQ----HA-EVLLSRY-----DQHASRLLDALHALYGQRADYASWLA----------------------QW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 53.0236% -13 - C4 -3CZG - ? A:[8-85] --------------------------------------------------------------------------PPALRAAFAGPLD--PQ----HA-EVLLSRY-----DQHASRLLDALHALYGQRADYASWLA----------------------QW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 51.7336% -15 - C4 -3CZE - ? A:[8-87] --------------------------------------------------------------------------PPALRAAFAGPL----------A-EVLLSRY-----DQHASRLLDALHALYGQRADYASWLA----------------------QW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 Fugue 50.7115% -13 - C1 -2OCC - COX3_BOVIN C:[1-261] --------------------------------------MTHQTH--------A---------------------YHMVNPS----PW--PL----TG-ALSALLM-----T---SGLTMWFHFNSM-------TLL----------------------MIGLTTNMLTMYQWWRDVIR---------------EST-----------FQGHHT--PA---VQKGLRYGMILFIIS-EVLFFTGFFWAFYHSSLAPTPELGGCWPP-TGIHPL-N-----------------PLEVP-L------L-NTSVLLA----SGVSITW-A-HHSLMEG------DRKHMLQALFITITL-G-VYFTLLQASEYYEAPFTISDGVYGSTF------FVA--------TGF--HGLHVIIGSTF----L------IVCFFRQLKFH---------F----TS--------NHHFGF-----------EAG--AW---YW---------------HFVDV------VWLFLYV-S----------IYWWGS------------------------------------------------------------
29 Fugue 46.9512% -7 - C2 -1UUH - CD44_HUMAN A:[20-169] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQIDLNIT---CRFAGVFHVEK-NGRYSISRTEAADL-----CKAFN-STLPTMA------QMEK---ALSIGFETCRYGF-I-EGHVVIPR---I-HPNSICAANNTGVYI-L-TSNTSQYDTYCFN---ASAPPEEDCTS------VTD--------LPN--AFDGPITITIV----N------RDGTRYVQKGE---------YRTNPED--------IY------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 45.0414% -18 - C4 -1Y88 Y1548_ARCFU A:[16-85] --------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQGHMVARLLE---------------EH-G----F--ET-KTNVIV--QG---NCV-EQEIDVVAERD-G--ERYMIECKFHNI----P----VYTGL-KEAMYT-YAR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 43.7827% -28 - C4 -3FOV Y323_RHOPA A:[25-77] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEASAADYLE---------------R-QG----Y--RILARRFKT--R--------CGEIDLVAQRD-ALVAFVEVKAR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 Fugue 43.4114% -50 * C1 *1PU1 - Y677_METTH A:[1-91] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------MSLRKLTEGDLD---------------EISS----FLHNTISDFILK--RV---SAKEIVDIDITVLVEYTDELKVDISAELYLD---ELSDADPGIVD-EAVDAA-YRSLESF-----LDGFR-E------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 43.1023% -4 * C3 *4CZ1 KYNB_BACAN A:[3-80] --------------------------------------------------------------------------------------------------------------------TSKWIDISQPLNNDIATWPG----------------------DTP-----FSYEVLW--SKE---------------ESGS----V--NVGKLTMSI--HT---GTHIDAPFHF---DN-DGKKVLDLDIQVYVG---PT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 42.4722% -34 - C4 -1XMX ? A:[250-315] --------------------------------------------------------------------------------------------------------------------------------------------------------------------NGEWLETLVHSTVK---------------QIQDDMPTI--QDRSLNVQV--YRQLGEREVRNELDVATVVN-NKLHIIE--CKTKGM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 42.0823% -1 - C3 -4CO9 KYNB_BACAN A:[5-82] --------------------------------------------------------------------------------------------------------------------TSKWIDISQPLNNDIATWPG----------------------DTP-----FSYEVLW--SKE---------------ESGS----V--NVGKLTMSI--HT---GTHIDAPFHF---DN-DGKKVLDLDIQVYVG---PT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 41.4140% 98 - C4 -3AJW FLIJ_SALTY A:[88-129] -----------------------------------------------------------------------------LQLT----QW--TQ----KV-DLALKSW-----REKKQRLQAWQTLQDRQTA--AALLA----------------------E-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 36.7617% -26 - C4 -1GEF - HJC_PYRFU A:[2-47] ------------------------------------------------------------------------------------------------------------------------------------------------------------------YRKGAQAERELIKLLE---------------KH-G----F--AVVRSA-------------GSKKVDLVAGNG-KKYLCIEV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 36.3814% -40 - C4 -2WCW HJC_ARCFU A:[7-59] --------------------------------------------------------------------------------------------------------------------------------------------------------------------KGTRFERDLLVELW---------------KA-G----F--AAIRVAGAG--------VSPFPCPDIVAGNG-RTYLAIEV--KMRK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------