@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1933: (2016-03-30 )
MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

8DG_A_11(1WUR)
?
[Raw transfer]



8GT_C_12(1WUQ)
?
[Raw transfer]



8DG_D_13(1WUR)
?
[Raw transfer]



8GT_C_13(1WUQ)
?
[Raw transfer]



8GT_D_14(1WUQ)
?
[Raw transfer]



8DG_C_12(1WUR)
?
[Raw transfer]



8DG_A_11(1WUR)
?
[Raw transfer]



8GT_A_15(1WUQ)
?
[Raw transfer]



GTP_D_20(4DU6)
?
[Raw transfer]



8DG_D_14(1WUR)
?
[Raw transfer]



8DG_A_15(1WUR)
?
[Raw transfer]



GTP_A_6(4DU6)
?
[Raw transfer]



GTP_E_24(4DU6)
?
[Raw transfer]



GTP_C_14(4DU6)
?
[Raw transfer]



GTP_B_11(4DU6)
?
[Raw transfer]



IPA_D_14(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_12(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_11(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_A_15(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_D_13(1FB1)
GCH1_HUMAN
[Raw transfer]
1 PsiBlast_PDB 99.46100%-126 - C11 -4UQF - ? -
5 PsiBlast_PDB 82.3148%-115 - C11 -1WPL - GCH1_RAT -
32 PsiBlast_CBE 81.8248%-112 - C11 -1IS8 - GCH1_RAT -
3 PsiBlast_PDB 81.8148%-112 - C11 -1IS7 - GCH1_RAT -
2 PsiBlast_PDB 81.8049%-105 - C11 -1FB1 - GCH1_HUMAN -
4 PsiBlast_PDB 81.7548%-110 - C11 -1IS8 - GCH1_RAT -
49 PsiBlast_CBE 81.7148%-110 - C11 -1IS7 - GCH1_RAT -
19 PsiBlast_CBE 81.5449%-106 - C11 -1FB1 3.5 GCH1_HUMAN
20 PsiBlast_CBE 81.5349%-109 - C11 -1FB1 3.4 GCH1_HUMAN
8 PsiBlast_PDB 81.2041%-113 - C11 -1WUR 5.2 ?
185 Fugue 81.0649%-106 - C11 -1FB1 3.8 GCH1_HUMAN
50 PsiBlast_CBE 80.9541%-115 - C11 -1WUR 5.1 ?
51 PsiBlast_CBE 80.9041%-111 - C11 -1WUR 5.4 ?
6 PsiBlast_PDB 80.7341%-112 - C11 -1WM9 - ? -
57 PsiBlast_CBE 80.7241%-113 - C11 -1WUQ 5.0 ?
52 PsiBlast_CBE 80.6141%-111 - C11 -1WUR 5.3 ?
61 PsiBlast_CBE 80.5441%-113 - C11 -1WM9 - ? -
53 PsiBlast_CBE 80.3641%-111 - C11 -1WUR 5.2 ?
54 PsiBlast_CBE 80.3541%-114 - C11 -1WUQ 4.9 ?
7 PsiBlast_PDB 80.2641%-114 - C11 -1WUQ - ? -
56 PsiBlast_CBE 80.1141%-116 - C11 -1WUQ 5.1 ?
21 PsiBlast_CBE 80.0049%-108 - C11 -1FB1 3.6 GCH1_HUMAN
22 PsiBlast_CBE 79.8949%-102 - C11 -1FB1 3.5 GCH1_HUMAN
55 PsiBlast_CBE 79.8741%-109 - C11 -1WUQ 5.0 ?
166 HHSearch 79.3540%-114 - C11 -1WUR 5.2 ?
64 PsiBlast_CBE 72.0136%-109 - C11 -4DU6 4.1 ?
9 PsiBlast_PDB 71.5836%-109 - C11 -4DU6 4.7 ?
65 PsiBlast_CBE 71.4936%-113 - C11 -4DU6 4.6 ?
62 PsiBlast_CBE 71.4936%-109 - C11 -4DU6 4.4 ?
63 PsiBlast_CBE 70.2836%-115 - C11 -4DU6 4.2 ?