@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0418: (2016-03-15 )
MITYDLIGNTPLVLLEHYSDDKVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQLAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSALQQIDYFVAGIGSGGTFTGTARYLKQHHVQCYAVEPEGSVLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGTIVVVFPDGSDRYMSKQIFNYEENDYE

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KOU_A_3(3PC4)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]



AA5_A_2(1Z7Y)
CYSK1_ARATH
[Raw transfer]



ILE_A_3(4IL5)
?
[Raw transfer]



MET_B_4(4JBL)
?
[Raw transfer]



4AT_A_4(2EFY)
?
[Raw transfer]



CYS_A_2(4LMB)
?
[Raw transfer]



CIT_A_4(2V03)
CYSM_ECOLI
[Raw transfer]



4AT_B_6(2EFY)
?
[Raw transfer]



AWH_A_3(3ZEI)
CYSK_MYCTU
[Raw transfer]



CYS_B_11(3BM5)
?
[Raw transfer]



CHAIN_C_2(4JBN)
?
[Raw transfer]
-
4MV_A_3(2ECO)
?
[Raw transfer]



PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]



PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]



PLP_B_10(3BM5)
?
[Raw transfer]



FGA_B_11(4AIR)
?
[Raw transfer]



PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_A_2(2ECQ)
?
[Raw transfer]



PLP_A_5(2PQM)
?
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_2(2ECO)
?
[Raw transfer]



PLP_A_5(2PQM)
?
[Raw transfer]



PLP_B_7(4LMA)
?
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_A_3(2EFY)
?
[Raw transfer]



PLP_A_9(3BM5)
?
[Raw transfer]



PLP_A_4(4LMB)
?
[Raw transfer]



PLP_B_6(3VBE)
?
[Raw transfer]



PLP_A_5(4LMA)
?
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_A_5(3VBE)
?
[Raw transfer]



PLP_B_5(2EFY)
?
[Raw transfer]



PLP_C_7(3VBE)
?
[Raw transfer]



PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_B_6(2PQM)
?
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_A_3(3PC2)
?
[Raw transfer]



PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]



PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]



PLP_C_9(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_D_8(3VBE)
?
[Raw transfer]



PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



FGA_B_12(4AIR)
?
[Raw transfer]



FGA_B_10(4AIR)
?
[Raw transfer]



3HL_A_3(2ECQ)
?
[Raw transfer]



CHAIN_P_3(1Y7L)
CYSK_HAEIN
[Raw transfer]
-
CHAIN_B_2(3TBH)
?
[Raw transfer]
-
CHAIN_B_2(3TBH)
?
[Raw transfer]
-
CHAIN_B_2(3T4P)
?
[Raw transfer]
-
CHAIN_B_3(2ISQ)
CYSK1_ARATH
[Raw transfer]
-
1 PsiBlast_PDB 92.2248% -62 - C2 -4R2V - CYSM_HELPY -
9 PsiBlast_PDB 89.4739% -65 - C2 -2ECQ 4.1 ?
14 PsiBlast_PDB 88.8238% -65 - C2 -2ISQ 7.4 CYSK1_ARATH
7 PsiBlast_PDB 88.8039% -65 - C2 -1VE1 3.8 ?
120 HHSearch 88.6539% -64 - C2 -1VE1 3.8 ?
8 PsiBlast_PDB 88.5639% -66 - C2 -2ECO 4.3 ?
13 PsiBlast_PDB 87.3638% -62 - C2 -1Z7W 3.9 CYSK1_ARATH
18 PsiBlast_PDB 87.3038% -62 - C2 -1Z7Y 3.8 CYSK1_ARATH
38 PsiBlast_CBE 87.1239% -64 - C2 -2EFY 3.4 ?
10 PsiBlast_PDB 86.4639% -65 - C2 -2EFY 3.5 ?
50 PsiBlast_CBE 85.0239% -66 - C2 -3ZEI 2.7 CYSK_MYCTU
52 PsiBlast_CBE 84.9637% -64 - C2 -4AEC 4.2 CYSKM_ARATH
56 PsiBlast_CBE 84.3638% -65 - C2 -2Q3B 3.0 CYSK_MYCTU
51 PsiBlast_CBE 84.2139% -58 - C2 -2Q3D 8.1 CYSK_MYCTU
113 HHSearch 84.1437% -60 - C2 -1Z7W 3.9 CYSK1_ARATH
97 PsiBlast_CBE 84.0436% -67 - C2 -3VBE 3.9 ?
59 PsiBlast_CBE 83.9637% -61 - C2 -4LMA 4.1 ?
96 PsiBlast_CBE 83.4636% -64 - C2 -3VBE 4.4 ?
112 HHSearch 83.4239% -60 * C2 *2Q3B 3.0 CYSK_MYCTU
94 PsiBlast_CBE 83.3636% -67 - C2 -3VBE 3.6 ?
58 PsiBlast_CBE 83.1637% -58 - C2 -4LMA 4.5 ?
53 PsiBlast_CBE 82.8637% -60 - C2 -4AEC 3.7 CYSKM_ARATH
67 PsiBlast_CBE 82.6736% -66 - C2 -3TBH 4.2 ?
95 PsiBlast_CBE 82.5136% -65 - C2 -3VBE 3.9 ?
47 PsiBlast_CBE 82.2633% -71 - C2 -2BHS 3.7 CYSM_ECOLI
68 PsiBlast_CBE 82.2136% -66 - C2 -3T4P 5.9 ?
5 PsiBlast_PDB 81.9735% -54 - C2 -4COO 4.4 CBS_HUMAN
15 PsiBlast_PDB 81.4033% -72 - C2 -2BHS 3.3 CYSM_ECOLI
32 PsiBlast_CBE 81.1435% -54 - C2 -4L0D 3.5 CBS_HUMAN
114 HHSearch 81.0835% -62 - C2 -3TBH 4.2 ?
122 HHSearch 80.7935% -66 - C2 -2PQM 3.9 ?
116 HHSearch 80.4935% -68 - C2 -1Y7L 5.3 CYSK_HAEIN
70 PsiBlast_CBE 80.4736% -53 - C2 -4LMB 4.1 ?
83 PsiBlast_CBE 80.2335% -65 - C2 -1FCJ 3.5 CYSK_SALTY
80 PsiBlast_CBE 80.0335% -63 - C2 -1OAS 4.0 CYSK_SALTY
82 PsiBlast_CBE 79.1935% -60 - C2 -1FCJ 3.0 CYSK_SALTY
102 Fugue 79.0235% -58 - C2 -1OAS 4.0 CYSK_SALTY
81 PsiBlast_CBE 78.9935% -64 - C2 -1FCJ 4.0 CYSK_SALTY
119 HHSearch 78.9134% -48 - C2 -3PC3 8.4 ?
79 PsiBlast_CBE 78.9035% -63 - C2 -1OAS 3.8 CYSK_SALTY
48 PsiBlast_CBE 78.7533% -69 - C2 -2BHS 3.5 CYSM_ECOLI
103 Fugue 78.5135% -49 - C2 -3PC3 8.4 ?
16 PsiBlast_PDB 78.3733% -67 - C2 -2V03 2.8 CYSM_ECOLI
46 PsiBlast_CBE 78.2933% -69 - C2 -2BHS 3.4 CYSM_ECOLI
60 PsiBlast_CBE 78.1234% -50 - C2 -3PC4 6.1 ?
84 PsiBlast_CBE 78.0435% -62 - C2 -1FCJ 3.6 CYSK_SALTY
62 PsiBlast_CBE 78.0334% -51 - C2 -3PC2 4.4 ?
85 PsiBlast_CBE 77.8234% -58 - C2 -4JBN 3.1 ?
61 PsiBlast_CBE 77.6634% -48 - C2 -3PC3 8.4 ?
117 HHSearch 77.5832% -57 - C2 -3DWG 3.8 CYSM_MYCTU
92 PsiBlast_CBE 77.5034% -56 - C2 -1D6S 4.9 CYSK_SALTY
57 PsiBlast_CBE 77.4936% -77 - C2 -4AIR 3.4 ?
93 PsiBlast_CBE 77.1534% -55 - C2 -1D6S 5.1 CYSK_SALTY
63 PsiBlast_CBE 76.2634% -57 - C2 -2PQM 3.6 ?
87 PsiBlast_CBE 75.5934% -55 - C2 -4IL5 3.2 ?
64 PsiBlast_CBE 75.1734% -56 - C2 -2PQM 4.2 ?
66 PsiBlast_CBE 73.9434% -56 - C2 -3BM5 5.6 ?
65 PsiBlast_CBE 73.3034% -48 - C2 -3BM5 4.5 ?
88 PsiBlast_CBE 72.4834% -48 - C2 -4JBL 3.9 ?