@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0597: (2016-03-17 )
MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTTKIKQELYGKDAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




CTP_D_4(1COZ)
TAGD_BACSU
[Raw transfer]




C2G_K_11(1N1D)
TAGD_BACSU
[Raw transfer]




CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




C2G_H_8(1N1D)
TAGD_BACSU
[Raw transfer]




CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




C2G_I_9(1N1D)
TAGD_BACSU
[Raw transfer]




C2G_J_10(1N1D)
TAGD_BACSU
[Raw transfer]




CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




48 HHSearch 94.34100%-117 - C2 -2B7L - ? -
1 PsiBlast_PDB 94.34100%-117 - C2 -2B7L - ? -
23 PsiBlast_CBE 92.5769%-109 - C2 -1N1D 7.2 TAGD_BACSU
3 PsiBlast_PDB 91.5769%-107 - C2 -1N1D 7.4 TAGD_BACSU
21 PsiBlast_CBE 91.1469%-103 - C2 -1N1D 7.0 TAGD_BACSU
24 PsiBlast_CBE 89.4469%-112 - C2 -1COZ 7.0 TAGD_BACSU
49 HHSearch 89.0670%-110 - C2 -1COZ 7.1 TAGD_BACSU
38 Fugue 88.8169%-110 - C2 -1COZ 7.1 TAGD_BACSU
2 PsiBlast_PDB 88.7769%-110 - C2 -1COZ 7.1 TAGD_BACSU
22 PsiBlast_CBE 88.3369%-103 - C2 -1N1D 7.6 TAGD_BACSU
39 Fugue 85.4966%-107 - C2 -1COZ 5.2 TAGD_BACSU
4 PsiBlast_PDB 68.0835% -97 - C2 -3ELB - PCY2_HUMAN -
58 HHSearch 65.3026% -98 - C2 -3K9W - COAD_BURP1 -
50 HHSearch 64.3723%-107 - C2 -3GLV - RIBL_THEVO -
18 PsiBlast_PDB 63.1521%-112 - C2 -3L92 - COAD_YERPE -
51 HHSearch 63.0826% -83 - C2 -3HL4 - PCY1A_RAT -
6 PsiBlast_PDB 62.9327% -95 - C2 -3HL4 - PCY1A_RAT -
19 PsiBlast_PDB 62.6421%-110 - C2 -3L93 - COAD_YERPE -
8 PsiBlast_PDB 62.3927% -96 - C2 -4MVD - PCY1A_RAT -
7 PsiBlast_PDB 62.1027% -94 - C2 -4MVC - PCY1A_RAT -