@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0917: (2016-03-20 )
MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPARIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_12(4DLK)
?
[Raw transfer]



ANP_A_2(4MA5)
?
[Raw transfer]



ATP_B_6(3V4S)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



ADP_B_4(3QFF)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



ADP_A_3(3QFF)
?
[Raw transfer]



ADP_A_3(3V4S)
?
[Raw transfer]



ADP_B_6(3R5H)
?
[Raw transfer]



ATP_A_3(3ETH)
PURK_ECOLI
[Raw transfer]



ADP_A_3(3R5H)
?
[Raw transfer]



AMP_A_2(4MA0)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_B_5(3AW8)
?
[Raw transfer]



ATP_A_7(4DLK)
?
[Raw transfer]



FMT_A_15(4M9U)
?
[Raw transfer]



ATP_A_8(4DLK)
?
[Raw transfer]
1 PsiBlast_PDB 94.8697% -89 - C1 -3ORQ 7.1 ?
125 HHSearch 92.3396% -86 - C1 -3ORQ 7.0 ?
24 PsiBlast_CBE 75.1643% -84 - C1 -3Q2O - ? -
23 PsiBlast_CBE 75.0743% -83 - C1 -3QFF 5.5 ?
4 PsiBlast_PDB 74.8643% -84 - C1 -3Q2O - ? -
3 PsiBlast_PDB 74.6843% -86 - C1 -4DLK 4.3 ?
5 PsiBlast_PDB 74.4943% -85 - C1 -3QFF 5.9 ?
6 PsiBlast_PDB 74.3743% -83 - C1 -3R5H 5.8 ?
21 PsiBlast_CBE 74.3443% -84 - C1 -4DLK 5.6 ?
7 PsiBlast_PDB 74.2743% -82 - C1 -3V4S 6.4 ?
25 PsiBlast_CBE 74.2243% -84 - C1 -3V4S 6.2 ?
22 PsiBlast_CBE 73.0743% -80 - C1 -3R5H 5.5 ?
129 HHSearch 72.8742% -73 * C1 *3Q2O - ? -
8 PsiBlast_PDB 70.1636% -73 - C1 -4E4T - ? -
26 PsiBlast_CBE 68.2336% -78 - C1 -4E4T - ? -
131 HHSearch 67.1839% -68 - C1 -3AX6 - ? -
11 PsiBlast_PDB 67.0030% -73 - C1 -3K5H - ? -
128 HHSearch 66.4933% -68 - C1 -3AW8 4.1 ?
15 PsiBlast_PDB 66.1732% -71 - C1 -4MAM 6.8 ?
13 PsiBlast_PDB 65.4832% -70 - C1 -4MA0 5.6 ?
16 PsiBlast_PDB 65.3332% -70 - C1 -4M9U 3.1 ?
27 PsiBlast_CBE 65.2132% -74 - C1 -3AW8 5.1 ?
14 PsiBlast_PDB 64.7532% -69 - C1 -4MA5 5.3 ?
10 PsiBlast_PDB 64.6332% -71 - C1 -3AW8 4.1 ?
134 HHSearch 60.4530% -58 - C1 -3ETH 7.3 PURK_ECOLI