@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1083: (2016-03-22 )
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNEDKQILERYKIGLKKG

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

21W_B_8(4MCB)
TRMD_HAEIN
[Raw transfer]



SAM_C_3(1UAK)
TRMD_HAEIN
[Raw transfer]



SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]



21X_A_3(4MCC)
TRMD_HAEIN
[Raw transfer]



21X_B_4(4MCC)
TRMD_HAEIN
[Raw transfer]



SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]



SAH_A_2(1P9P)
TRMD_ECOLI
[Raw transfer]



SFG_A_2(4YVH)
?
[Raw transfer]



SFG_B_5(4YVI)
?
[Raw transfer]



21W_A_5(4MCB)
TRMD_HAEIN
[Raw transfer]



SAH_A_3(4H3Y)
TRMD_BURP8
[Raw transfer]



SAH_E_5(1UAM)
TRMD_HAEIN
[Raw transfer]



SFG_B_5(4YVK)
?
[Raw transfer]



SAM_A_2(4YVG)
?
[Raw transfer]



SFG_B_5(4YVJ)
?
[Raw transfer]



SAH_A_2(4IG6)
TRMD_ANAPZ
[Raw transfer]



SFG_A_4(4YVI)
?
[Raw transfer]



SAH_A_3(4H3Z)
TRMD_BURP8
[Raw transfer]



SFG_A_4(4YVK)
?
[Raw transfer]



ADN_A_2(3AXZ)
TRMD_HAEIN
[Raw transfer]



SAH_B_6(4H3Z)
TRMD_BURP8
[Raw transfer]



SFG_A_4(4YVJ)
?
[Raw transfer]



22L_A_2(4MCD)
TRMD_HAEIN
[Raw transfer]



EDO_B_6(3QUV)
?
[Raw transfer]



EDO_A_3(3QUV)
?
[Raw transfer]



EDO_A_3(3QUV)
?
[Raw transfer]
54 Fugue 98.8144%-118 * C5 *1UAL 6.4 TRMD_HAEIN
22 PsiBlast_CBE 96.4944%-114 - C5 -4MCB 7.0 TRMD_HAEIN
2 PsiBlast_PDB 96.1844%-120 - C5 -1UAK 7.8 TRMD_HAEIN
4 PsiBlast_PDB 96.0244%-111 - C5 -1UAM 7.3 TRMD_HAEIN
3 PsiBlast_PDB 95.9344%-121 - C5 -1UAL 6.4 TRMD_HAEIN
23 PsiBlast_CBE 95.8644%-114 - C5 -4YVK 6.2 ?
11 PsiBlast_PDB 95.7344%-119 - C5 -4YVI 7.2 ?
9 PsiBlast_PDB 95.5344%-118 - C5 -4YVG 7.9 ?
25 PsiBlast_CBE 95.2544%-112 - C5 -4YVI 7.3 ?
12 PsiBlast_PDB 95.1344%-116 - C5 -4YVJ 7.4 ?
24 PsiBlast_CBE 95.0644%-110 - C5 -4YVJ 6.0 ?
7 PsiBlast_PDB 95.0644%-119 - C5 -4MCD 5.8 TRMD_HAEIN
10 PsiBlast_PDB 94.6644%-116 - C5 -4YVH 7.2 ?
8 PsiBlast_PDB 94.3744%-120 - C5 -3AXZ 5.8 TRMD_HAEIN
21 PsiBlast_CBE 93.5544%-121 - C5 -4MCC 6.6 TRMD_HAEIN
1 PsiBlast_PDB 93.5444%-123 - C5 -1UAJ - TRMD_HAEIN -
13 PsiBlast_PDB 93.5244%-116 - C5 -4YVK 7.7 ?
28 PsiBlast_CBE 92.1944%-120 - C5 -3QUV 2.9 ?
14 PsiBlast_PDB 92.0943%-114 - C5 -1P9P 6.6 TRMD_ECOLI
15 PsiBlast_PDB 91.8544%-121 - C5 -4H3Y 7.1 TRMD_BURP8
16 PsiBlast_PDB 91.2844%-122 - C5 -4H3Z 7.4 TRMD_BURP8
20 PsiBlast_PDB 90.4442%-111 - C5 -4IG6 7.3 TRMD_ANAPZ
18 PsiBlast_PDB 90.4344%-122 - C5 -3QUV 3.1 ?
26 PsiBlast_CBE 90.1444%-119 - C5 -4H3Z 6.4 TRMD_BURP8
32 HHSearch 89.7544%-116 - C5 -3QUV 3.1 ?
6 PsiBlast_PDB 87.3644%-123 - C5 -4MCC 6.5 TRMD_HAEIN
5 PsiBlast_PDB 86.2944%-123 - C5 -4MCB 6.8 TRMD_HAEIN