@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1351: (2016-03-24 )
MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSRDIKELQLIKVPIPSGQYVYSLPNDRKFHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPGNAQSIGAILDQINWEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ARG_B_4(2P5M)
ARGR_BACSU
[Raw transfer]




ARG_B_4(2P5M)
ARGR_BACSU
[Raw transfer]




ARG_B_4(2P5M)
ARGR_BACSU
[Raw transfer]




ARG_B_4(2P5M)
ARGR_BACSU
[Raw transfer]




ARG_F_11(1B4B)

[Raw transfer]




ARG_E_9(1B4B)
ARGR_GEOSE
[Raw transfer]




GGB_B_16(3LAP)
ARGR_MYCTU
[Raw transfer]




NACID_H_8(3LAP)
ARGR_MYCTU
[Raw transfer]

-

NACID_H_8(3LAJ)
ARGR_MYCTU
[Raw transfer]

-

NACID_L_12(3LAP)
ARGR_MYCTU
[Raw transfer]

-

NACID_J_10(3LAP)
ARGR_MYCTU
[Raw transfer]

-

ARG_F_11(1B4B)
ARGR_GEOSE
[Raw transfer]




NACID_G_7(3FHZ)
ARGR_MYCTU
[Raw transfer]

-

NACID_L_12(3LAJ)
ARGR_MYCTU
[Raw transfer]

-

ARG_F_11(1B4B)
ARGR_GEOSE
[Raw transfer]




ARG_F_11(1B4B)
ARGR_GEOSE
[Raw transfer]




NACID_I_9(3FHZ)
ARGR_MYCTU
[Raw transfer]

-

NACID_J_10(3LAJ)
ARGR_MYCTU
[Raw transfer]

-

GGB_D_22(3LAP)
ARGR_MYCTU
[Raw transfer]




GGB_F_26(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_F_18(3LAJ)
ARGR_MYCTU
[Raw transfer]




ARG_D_14(1XXA)
ARGR_ECOLI
[Raw transfer]




ARG_F_12(2ZFZ)
ARGR_MYCTU
[Raw transfer]




ARG_D_16(3LAJ)
ARGR_MYCTU
[Raw transfer]




GGB_F_26(3LAP)
ARGR_MYCTU
[Raw transfer]




GGB_E_25(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_C_15(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_E_17(3LAJ)
ARGR_MYCTU
[Raw transfer]




2 PsiBlast_PDB 93.0860%-128 - C8 -1F9N - ARGR_BACSU -
71 HHSearch 92.2960%-132 - C8 -1B4A - ARGR_GEOSE -
1 PsiBlast_PDB 92.2960%-132 - C9 -1B4A - ARGR_GEOSE -
26 PsiBlast_CBE 73.6832%-115 - C8 -3LAP 4.7 ARGR_MYCTU
35 PsiBlast_CBE 73.3232%-119 - C8 -3FHZ 4.7 ARGR_MYCTU
37 PsiBlast_CBE 73.0432%-108 - C9 -3FHZ - ARGR_MYCTU -
38 PsiBlast_CBE 72.9932%-110 - C9 -3FHZ - ARGR_MYCTU -
25 PsiBlast_CBE 72.9032%-114 - C8 -3LAP 4.7 ARGR_MYCTU
36 PsiBlast_CBE 72.8432%-119 - C8 -3FHZ 3.9 ARGR_MYCTU
39 PsiBlast_CBE 72.8232%-109 - C9 -3FHZ - ARGR_MYCTU -
27 PsiBlast_CBE 72.6032%-114 - C8 -3LAP 4.8 ARGR_MYCTU
5 PsiBlast_PDB 72.5832%-109 - C8 -3ERE - ARGR_MYCTU -
6 PsiBlast_PDB 72.5232%-119 - C8 -3FHZ 2.8 ARGR_MYCTU
31 PsiBlast_CBE 72.4532%-120 - C8 -3LAJ 3.6 ARGR_MYCTU
32 PsiBlast_CBE 72.3932%-119 - C8 -3LAJ 4.7 ARGR_MYCTU
30 PsiBlast_CBE 72.1032%-120 - C8 -3LAJ 4.6 ARGR_MYCTU
21 PsiBlast_CBE 71.5856%-154 - C8 -2P5M 3.8 ARGR_BACSU
7 PsiBlast_PDB 71.5432%-113 - C8 -3LAJ 2.8 ARGR_MYCTU
73 HHSearch 71.4633%-116 - C8 -3LAP 3.3 ARGR_MYCTU
29 PsiBlast_CBE 71.3232%-112 - C8 -3LAP 3.0 ARGR_MYCTU
8 PsiBlast_PDB 70.9432%-110 - C8 -3LAP 3.3 ARGR_MYCTU
34 PsiBlast_CBE 70.8732%-114 - C8 -3LAJ 2.5 ARGR_MYCTU
28 PsiBlast_CBE 70.8732%-112 - C8 -3LAP 3.3 ARGR_MYCTU
33 PsiBlast_CBE 70.5832%-109 - C8 -3LAJ 2.8 ARGR_MYCTU
22 PsiBlast_CBE 69.2956%-145 - C8 -2P5M 3.9 ARGR_BACSU
74 HHSearch 67.7457%-148 - C8 -2P5M 3.8 ARGR_BACSU
3 PsiBlast_PDB 67.5056%-139 - C8 -2P5M 3.9 ARGR_BACSU
23 PsiBlast_CBE 65.9754%-159 - C8 -1B4B 2.5
64 Fugue 64.7653%-152 - C8 -1B4B 2.8 ARGR_GEOSE
24 PsiBlast_CBE 64.6354%-149 - C8 -1B4B 2.6 ARGR_GEOSE
76 HHSearch 64.3454%-153 - C8 -1B4B 2.8 ARGR_GEOSE
4 PsiBlast_PDB 64.3454%-153 - C8 -1B4B 2.8 ARGR_GEOSE
75 HHSearch 55.8433%-132 - C8 -2ZFZ 3.0 ARGR_MYCTU
77 HHSearch 55.5933%-137 * C8 *1XXA 2.8 ARGR_ECOLI