@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1974: (2016-03-30 )
MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAKLYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPKPGESVGRLVNVDCKDTVLEYSELDPEVANQFNNANIGIHAFKLGFILNAVNRELPYHLAIKNLKQLDENFGVIEQPTLKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNKEGKDSVATATEDLRRMGLI

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD2_A_3(1JVG)
UAP1_HUMAN
[Raw transfer]



UD2_A_3(1JVG)
UAP1_HUMAN
[Raw transfer]



UD1_B_8(2YQJ)
UAP1_CANAX
[Raw transfer]



UD1_A_4(2YQS)
UAP1_CANAX
[Raw transfer]



UD1_A_7(2YQJ)
UAP1_CANAX
[Raw transfer]



UD1_A_3(1JV1)
UAP1_HUMAN
[Raw transfer]



UD1_A_3(1JV1)
UAP1_HUMAN
[Raw transfer]



UD1_A_3(1JV1)
UAP1_HUMAN
[Raw transfer]



UD1_D_4(1JVD)
UAP1_HUMAN
[Raw transfer]



UD1_C_3(1JVD)
UAP1_HUMAN
[Raw transfer]



UD2_B_4(1JV3)
UAP1_HUMAN
[Raw transfer]



UD2_B_4(1JVG)
UAP1_HUMAN
[Raw transfer]



UD2_A_3(1JV3)
UAP1_HUMAN
[Raw transfer]



UD1_B_4(1JV1)
UAP1_HUMAN
[Raw transfer]



GN1_B_4(2YQH)
UAP1_CANAX
[Raw transfer]



GN1_A_3(2YQH)
UAP1_CANAX
[Raw transfer]



GOL_A_3(4BMA)
?
[Raw transfer]



EDO_A_3(3OC9)
?
[Raw transfer]



EDO_A_3(3OC9)
?
[Raw transfer]
27 HHSearch 93.4234% -74 - C5 -1JV1 7.5 UAP1_HUMAN
50 Fugue 93.0833% -69 - C5 -1JVG 8.2 UAP1_HUMAN
51 Fugue 92.6633% -74 - C5 -1JV1 7.5 UAP1_HUMAN
28 HHSearch 92.2132% -71 - C5 -2YQC - UAP1_CANAX -
1 PsiBlast_PDB 91.8434% -75 - C5 -4BMA 3.2 ?
6 PsiBlast_PDB 89.6631% -71 - C5 -1VM8 - UAP1_MOUSE -
24 PsiBlast_CBE 89.0936% -79 - C5 -1JVD 8.6 UAP1_HUMAN
11 PsiBlast_PDB 88.9432% -80 - C5 -4BQH - ? -
21 PsiBlast_CBE 88.8836% -82 - C5 -1JV3 8.7 UAP1_HUMAN
22 PsiBlast_CBE 88.7036% -83 - C5 -1JV1 9.0 UAP1_HUMAN
5 PsiBlast_PDB 88.5636% -79 - C5 -1JVG 8.2 UAP1_HUMAN
23 PsiBlast_CBE 87.9736% -85 - C5 -1JVG 8.1 UAP1_HUMAN
4 PsiBlast_PDB 87.5236% -86 - C5 -1JVD 8.0 UAP1_HUMAN
7 PsiBlast_PDB 87.4635% -77 - C5 -2YQC - UAP1_CANAX -
2 PsiBlast_PDB 87.4236% -82 - C5 -1JV1 7.5 UAP1_HUMAN
25 PsiBlast_CBE 86.2435% -75 - C5 -2YQJ 8.2 UAP1_CANAX
3 PsiBlast_PDB 85.5036% -78 - C5 -1JV3 8.3 UAP1_HUMAN
8 PsiBlast_PDB 85.4135% -76 - C5 -2YQH 4.1 UAP1_CANAX
10 PsiBlast_PDB 85.2835% -76 - C5 -2YQS 9.1 UAP1_CANAX
9 PsiBlast_PDB 85.2735% -75 - C5 -2YQJ 8.3 UAP1_CANAX
26 PsiBlast_CBE 85.2635% -84 - C5 -2YQH 4.5 UAP1_CANAX
31 HHSearch 83.9034% -88 - C5 -3OC9 2.9 ?
12 PsiBlast_PDB 82.6234% -91 - C5 -3OC9 2.9 ?