@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0815: (2015-12-18 )
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRTAALLQTGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGVGGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKKLADKIMVDLIGFFIQDENRPARNEVFLALESLGFKSAEINPVLKTLKPHLSIEAAIKEALQQLRS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(2ZTC)
RUVA_MYCTU
[Raw transfer]




GOL_O_15(2H5X)
RUVA_MYCTU
[Raw transfer]




GOL_A_3(2ZTD)
RUVA_MYCTU
[Raw transfer]




GOL_D_8(2ZTC)
RUVA_MYCTU
[Raw transfer]




GOL_M_13(2H5X)
RUVA_MYCTU
[Raw transfer]




GOL_B_5(2ZTD)
RUVA_MYCTU
[Raw transfer]




GOL_B_6(2ZTC)
RUVA_MYCTU
[Raw transfer]




GOL_K_11(2H5X)
RUVA_MYCTU
[Raw transfer]




NACID_B_1(1C7Y)
RUVA_ECOLI
[Raw transfer]

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32 HHSearch 87.9631%-133 - C4 -2ZTD 3.0 RUVA_MYCTU
31 HHSearch 87.8037%-126 - C4 -1CUK - RUVA_ECOLI -
3 PsiBlast_PDB 86.7837%-148 - C4 -1HJP - RUVA_ECOLI -
2 PsiBlast_PDB 86.6437%-139 - C4 -1C7Y 2.6 RUVA_ECOLI
24 PsiBlast_CBE 86.0831%-134 - C4 -2H5X 3.0 RUVA_MYCTU
4 PsiBlast_PDB 84.7137%-141 - C4 -1CUK - RUVA_ECOLI -
28 PsiBlast_CBE 84.5731%-128 - C4 -2ZTC 3.1 RUVA_MYCTU
27 PsiBlast_CBE 84.3631%-127 - C4 -2ZTD 2.4 RUVA_MYCTU
8 PsiBlast_PDB 84.2431%-127 - C4 -2ZTD - RUVA_MYCTU -
6 PsiBlast_PDB 83.4131%-129 - C4 -2H5X - RUVA_MYCTU -
7 PsiBlast_PDB 83.4031%-129 - C4 -2ZTC 3.0 RUVA_MYCTU
29 PsiBlast_CBE 83.2631%-125 - C4 -2ZTC - RUVA_MYCTU -
30 PsiBlast_CBE 83.2231%-127 - C4 -2ZTC 3.2 RUVA_MYCTU
25 PsiBlast_CBE 83.1731%-125 - C4 -2H5X 3.0 RUVA_MYCTU
26 PsiBlast_CBE 82.9431%-129 - C4 -2H5X 2.8 RUVA_MYCTU
5 PsiBlast_PDB 71.1345%-148 - C4 -1D8L - RUVA_ECOLI -
10 PsiBlast_PDB 67.6031%-131 - C4 -1IXR - RUVA_THET8 -
33 HHSearch 67.2832%-126 - C4 -1IXR - RUVA_THET8 -
9 PsiBlast_PDB 67.2331%-120 - C4 -2ZTE - RUVA_MYCTU -
23 PsiBlast_CBE 60.5437% 67 - C- -1BDX - RUVA_ECOLI -