@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1075: (2015-12-20 )
MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKNPKHTIFLSAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELGADEVFCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFENNYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

21W_B_8(4MCB)
TRMD_HAEIN
[Raw transfer]



SAH_A_2(1P9P)
TRMD_ECOLI
[Raw transfer]



21X_A_3(4MCC)
TRMD_HAEIN
[Raw transfer]



21X_B_4(4MCC)
TRMD_HAEIN
[Raw transfer]



SFG_A_4(4YVK)
?
[Raw transfer]



SFG_A_2(4YVH)
?
[Raw transfer]



ADN_A_2(3AXZ)
TRMD_HAEIN
[Raw transfer]



SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]



SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]



SAH_E_5(1UAM)
TRMD_HAEIN
[Raw transfer]



SAH_A_2(4IG6)
TRMD_ANAPZ
[Raw transfer]



SFG_B_5(4YVK)
?
[Raw transfer]



SAM_C_3(1UAK)
TRMD_HAEIN
[Raw transfer]



SFG_B_5(4YVJ)
?
[Raw transfer]



SFG_B_5(4YVI)
?
[Raw transfer]



SFG_A_4(4YVJ)
?
[Raw transfer]



SAM_A_2(4YVG)
?
[Raw transfer]



SFG_A_4(4YVI)
?
[Raw transfer]



22L_A_2(4MCD)
TRMD_HAEIN
[Raw transfer]



EDO_A_3(3QUV)
?
[Raw transfer]



EDO_A_3(3QUV)
?
[Raw transfer]
5 PsiBlast_PDB 95.7435%-118 - C4 -3AXZ 5.4 TRMD_HAEIN
53 Fugue 95.2136%-113 * C4 *1UAL 5.8 TRMD_HAEIN
14 PsiBlast_PDB 95.1535%-109 - C4 -1UAM 6.3 TRMD_HAEIN
4 PsiBlast_PDB 94.9035%-115 - C4 -4MCD 4.8 TRMD_HAEIN
11 PsiBlast_PDB 94.8135%-120 - C4 -1UAJ - TRMD_HAEIN -
23 PsiBlast_CBE 94.7835%-110 - C4 -4YVK 5.2 ?
10 PsiBlast_PDB 94.4735%-117 - C4 -4YVK 6.7 ?
25 PsiBlast_CBE 94.4435%-109 - C4 -4YVI 6.1 ?
26 PsiBlast_CBE 94.3031%-111 - C4 -4H3Z - TRMD_BURP8 -
7 PsiBlast_PDB 94.2935%-115 - C4 -4YVH 6.4 ?
22 PsiBlast_CBE 94.2635%-110 - C4 -4MCB 5.9 TRMD_HAEIN
9 PsiBlast_PDB 94.2635%-114 - C4 -4YVJ 6.7 ?
12 PsiBlast_PDB 94.2335%-115 - C4 -1UAK 6.8 TRMD_HAEIN
6 PsiBlast_PDB 94.0735%-118 - C4 -4YVG 6.7 ?
13 PsiBlast_PDB 94.0135%-118 - C4 -1UAL 5.8 TRMD_HAEIN
21 PsiBlast_CBE 93.7735%-118 - C4 -4MCC 5.3 TRMD_HAEIN
24 PsiBlast_CBE 93.7135%-112 - C4 -4YVJ 5.0 ?
19 PsiBlast_PDB 93.7031%-114 - C4 -4H3Z - TRMD_BURP8 -
8 PsiBlast_PDB 93.6935%-116 - C4 -4YVI 6.8 ?
18 PsiBlast_PDB 93.3231%-111 - C4 -4H3Y - TRMD_BURP8 -
17 PsiBlast_PDB 91.7735%-110 - C4 -4IG6 6.6 TRMD_ANAPZ
15 PsiBlast_PDB 91.7432%-117 - C4 -1P9P 6.1 TRMD_ECOLI
3 PsiBlast_PDB 90.8835%-122 - C4 -4MCC 5.1 TRMD_HAEIN
31 HHSearch 84.3431%-124 - C4 -3QUV 3.2 ?
20 PsiBlast_PDB 84.2830%-127 - C4 -3QUV 3.2 ?