@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1257: (2015-12-22 )
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWVEDNPNDGSKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSLEIQRLQLEIGGLRGVKFAKLTKASSFEYNE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_11(2WVC)
NIKR_HELPY
[Raw transfer]



GOL_D_15(2WVD)
NIKR_HELPY
[Raw transfer]



GOL_B_14(2WVF)
NIKR_HELPY
[Raw transfer]



CIT_B_11(2CAD)
NIKR_HELPY
[Raw transfer]



GOL_B_12(2CA9)
NIKR_HELPY
[Raw transfer]



FMT_A_7(2WVF)
NIKR_HELPY
[Raw transfer]



GOL_D_16(2WVD)
NIKR_HELPY
[Raw transfer]



GOL_B_7(2CAJ)
NIKR_HELPY
[Raw transfer]
6 PsiBlast_PDB 88.3795%-130 - C6 -2WVB - NIKR_HELPY -
4 PsiBlast_PDB 87.5196%-126 - C6 -2WVC - NIKR_HELPY -
29 PsiBlast_CBE 87.2297%-118 - C6 -2WVD - NIKR_HELPY -
67 HHSearch 86.4797%-124 - C6 -2WVF 3.2 NIKR_HELPY
5 PsiBlast_PDB 86.2796%-124 - C6 -2WVF - NIKR_HELPY -
24 PsiBlast_CBE 84.4597%-107 - C6 -2CAJ 2.5 NIKR_HELPY
1 PsiBlast_PDB 84.4497%-133 - C6 -2CAJ - NIKR_HELPY -
28 PsiBlast_CBE 83.8797%-118 - C6 -2WVD 2.8 NIKR_HELPY
25 PsiBlast_CBE 83.7897%-116 - C6 -2CAD 3.1 NIKR_HELPY
2 PsiBlast_PDB 83.4097%-115 - C6 -3LGH - NIKR_HELPY -
23 PsiBlast_CBE 83.1797%-106 - C6 -3LGH - NIKR_HELPY -
3 PsiBlast_PDB 83.0897%-119 - C6 -2WVD 2.9 NIKR_HELPY
26 PsiBlast_CBE 82.7897%-104 - C6 -2CA9 3.3 NIKR_HELPY
31 PsiBlast_CBE 82.1896%-109 - C6 -2WVF 2.7 NIKR_HELPY
32 PsiBlast_CBE 80.2896%-103 - C6 -2WVC 2.4 NIKR_HELPY
30 PsiBlast_CBE 80.1597%-114 - C6 -2WVE - NIKR_HELPY -
8 PsiBlast_PDB 72.3297%-133 - C6 -3QSI - NIKR_HELPY -
39 PsiBlast_CBE 71.1197%-137 - C6 -3QSI - NIKR_HELPY -
37 PsiBlast_CBE 70.8697%-131 - C6 -3QSI - NIKR_HELPY -
41 PsiBlast_CBE 70.6197%-134 - C6 -3QSI - NIKR_HELPY -