@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0844: (2015-12-03 )
MRKKPIIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTRSDRTIRQDPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDMEERDRSLDSIIEQYTEVVKPMYHQFIEPTKRYADIVIPEGVSNIVAIDLINTKVASILNEAK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_D_4(1UDW)
UCK2_HUMAN
[Raw transfer]



UTP_D_4(1UEI)
UCK2_HUMAN
[Raw transfer]



ACP_B_6(3W34)
URK_THET8
[Raw transfer]



ACP_A_4(3W34)
URK_THET8
[Raw transfer]



ADP_A_5(2UVQ)
UCK1_HUMAN
[Raw transfer]



ADP_B_8(1UJ2)
UCK2_HUMAN
[Raw transfer]



CIT_F_6(1UEJ)
UCK2_HUMAN
[Raw transfer]



ADP_A_6(1UJ2)
UCK2_HUMAN
[Raw transfer]



ADP_B_8(1XRJ)
UCK2_HUMAN
[Raw transfer]



DPO_A_2(3R20)
?
[Raw transfer]



ACP_B_6(3W8R)
URK_THET8
[Raw transfer]



C5P_B_4(3ASZ)
URK_THET8
[Raw transfer]



CTN_D_4(1UEJ)
UCK2_HUMAN
[Raw transfer]
32 HHSearch 94.6148% -89 * C2 *3W34 3.4 URK_THET8
11 PsiBlast_PDB 93.7541% -94 - C2 -2JEO - UCK1_HUMAN -
12 PsiBlast_PDB 93.5641% -94 - C2 -2UVQ - UCK1_HUMAN -
8 PsiBlast_PDB 93.0642% -93 - C2 -1UEJ - UCK2_HUMAN -
9 PsiBlast_PDB 92.2942% -91 - C2 -1UFQ - UCK2_HUMAN -
5 PsiBlast_PDB 92.1642% -93 - C2 -1XRJ - UCK2_HUMAN -
7 PsiBlast_PDB 91.6242% -92 - C2 -1UEI - UCK2_HUMAN -
26 PsiBlast_CBE 91.2942% -91 - C2 -1UEJ 7.2 UCK2_HUMAN
28 PsiBlast_CBE 91.1842% -92 - C2 -1UDW 10.2 UCK2_HUMAN
6 PsiBlast_PDB 91.0442% -91 - C2 -1UDW - UCK2_HUMAN -
27 PsiBlast_CBE 90.4942% -90 - C2 -1UEI 10.1 UCK2_HUMAN
30 HHSearch 90.4442% -92 - C2 -2JEO - UCK1_HUMAN -
25 PsiBlast_CBE 90.4042% -89 - C2 -1UJ2 6.8 UCK2_HUMAN
24 PsiBlast_CBE 89.8642% -93 - C2 -1XRJ 5.4 UCK2_HUMAN
10 PsiBlast_PDB 89.5042% -92 - C2 -1UJ2 - UCK2_HUMAN -
51 Fugue 88.6141% -89 - C2 -2JEO - UCK1_HUMAN -
29 HHSearch 88.0643% -87 - C2 -1UJ2 6.4 UCK2_HUMAN
50 Fugue 87.9841% -91 - C2 -2UVQ 6.3 UCK1_HUMAN
21 PsiBlast_CBE 87.5450% -82 - C2 -3W8R 3.9 URK_THET8
1 PsiBlast_PDB 87.1250% -81 - C2 -3W8R - URK_THET8 -
22 PsiBlast_CBE 85.1949% -83 - C2 -3W34 3.9 URK_THET8
23 PsiBlast_CBE 84.5949% -80 - C2 -3ASZ 6.6 URK_THET8