@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0941: (2015-12-04 )
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TYU_C_12(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_B_11(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_D_13(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_A_10(2FR5)
CDD_MOUSE
[Raw transfer]




URI_B_11(2FR6)
CDD_MOUSE
[Raw transfer]




THU_B_5(1UWZ)
CDD_BACSU
[Raw transfer]




THU_A_3(1UWZ)
CDD_BACSU
[Raw transfer]




THU_A_5(1UX1)
CDD_BACSU
[Raw transfer]




THU_B_8(1UX1)
CDD_BACSU
[Raw transfer]




THU_D_12(1UX1)
CDD_BACSU
[Raw transfer]




THU_C_10(1UX1)
CDD_BACSU
[Raw transfer]




CTN_A_10(2FR6)
CDD_MOUSE
[Raw transfer]




THU_B_6(1JTK)
CDD_BACSU
[Raw transfer]




CTN_C_12(2FR6)
CDD_MOUSE
[Raw transfer]




THU_A_5(1JTK)
CDD_BACSU
[Raw transfer]




CTN_D_13(2FR6)
CDD_MOUSE
[Raw transfer]




THU_B_5(1UX0)
CDD_BACSU
[Raw transfer]




BRD_B_6(1MQ0)
CDD_HUMAN
[Raw transfer]




URD_B_11(1ZAB)
CDD_MOUSE
[Raw transfer]




URD_C_12(1ZAB)
CDD_MOUSE
[Raw transfer]




URD_D_13(1ZAB)
CDD_MOUSE
[Raw transfer]




EDO_D_12(3R2N)
?
[Raw transfer]




EDO_A_6(3R2N)
?
[Raw transfer]




EDO_B_8(3R2N)
?
[Raw transfer]




EDO_A_6(3R2N)
?
[Raw transfer]




MRD_D_13(3DMO)
?
[Raw transfer]




EDO_C_10(3R2N)
?
[Raw transfer]




MRD_B_11(3DMO)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




MRD_C_12(3DMO)
?
[Raw transfer]




NH3_B_14(2FR6)
CDD_MOUSE
[Raw transfer]




MRD_C_12(3DMO)
?
[Raw transfer]




TYU_C_12(2FR5)
CDD_MOUSE
[Raw transfer]




21 PsiBlast_CBE 92.6060% -89 - C5 -2D30 - ? -
109 HHSearch 91.3956% -82 - C5 -2FR5 2.6 CDD_MOUSE
1 PsiBlast_PDB 90.3660% -83 - C5 -2D30 - ? -
105 HHSearch 89.9759% -83 - C5 -2D30 - ? -
25 PsiBlast_CBE 88.9657% -85 - C5 -1MQ0 3.8 CDD_HUMAN
7 PsiBlast_PDB 88.9660% -91 - C5 -1ZAB - CDD_MOUSE -
36 PsiBlast_CBE 88.6160% -88 - C5 -1ZAB 3.8 CDD_MOUSE
5 PsiBlast_PDB 88.2457% -88 - C5 -1MQ0 - CDD_HUMAN -
8 PsiBlast_PDB 87.8360% -89 - C5 -2FR5 4.1 CDD_MOUSE
29 PsiBlast_CBE 87.7660% -86 - C5 -2FR6 3.5 CDD_MOUSE
106 HHSearch 87.3152% -89 - C5 -3DMO 2.9 ?
31 PsiBlast_CBE 87.2660% -90 - C5 -2FR6 4.0 CDD_MOUSE
35 PsiBlast_CBE 87.1260% -91 - C5 -1ZAB 3.3 CDD_MOUSE
33 PsiBlast_CBE 87.1060% -87 - C5 -2FR5 3.9 CDD_MOUSE
34 PsiBlast_CBE 86.9760% -91 - C5 -2FR5 4.0 CDD_MOUSE
30 PsiBlast_CBE 86.4960% -85 - C5 -2FR6 3.7 CDD_MOUSE
32 PsiBlast_CBE 86.4660% -87 - C5 -2FR5 4.0 CDD_MOUSE
37 PsiBlast_CBE 86.0860% -86 - C5 -1ZAB 3.7 CDD_MOUSE
9 PsiBlast_PDB 86.0260% -87 - C5 -2FR6 3.6 CDD_MOUSE
6 PsiBlast_PDB 85.1452% -89 - C5 -1UX1 3.8 CDD_BACSU
24 PsiBlast_CBE 84.8952% -85 - C5 -1UWZ 3.8 CDD_BACSU
27 PsiBlast_CBE 84.7152% -86 - C5 -1UX1 3.8 CDD_BACSU
26 PsiBlast_CBE 84.6952% -86 - C5 -1UX1 3.8 CDD_BACSU
28 PsiBlast_CBE 84.3352% -86 - C5 -1UX1 3.9 CDD_BACSU
107 HHSearch 84.1452% -84 - C5 -1UWZ 3.7 CDD_BACSU
22 PsiBlast_CBE 83.6853% -86 - C5 -1JTK 3.9 CDD_BACSU
23 PsiBlast_CBE 83.0552% -85 - C5 -1UX0 4.1 CDD_BACSU
123 Fugue 82.8552% -85 - C5 -1JTK 3.9 CDD_BACSU
39 PsiBlast_CBE 81.0355%-103 - C5 -3DMO 3.0 ?
10 PsiBlast_PDB 80.8055%-109 - C5 -3DMO 3.1 ?
40 PsiBlast_CBE 80.7455%-102 - C5 -3DMO 3.0 ?
38 PsiBlast_CBE 80.6255%-108 - C5 -3DMO 3.0 ?
52 PsiBlast_CBE 75.9938% -79 - C5 -3R2N 3.8 ?
54 PsiBlast_CBE 75.6638% -81 - C5 -3R2N 3.8 ?
53 PsiBlast_CBE 75.6138% -78 - C5 -3R2N 2.4 ?
111 HHSearch 73.3437% -78 - C5 -3R2N 3.6 ?
17 PsiBlast_PDB 72.2038% -79 - C5 -3R2N 3.6 ?