@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1424: (2015-12-07 )
MKIDILTLFPEMFAPLEHSIVGKAKERGLLEINYHNFRENAEKSRHVDDEPYGGGQGMLLRAQPIFDTIDKIDAQKARVILLDPAGRTFDQDFAEELSKEDELIFICGHYEGYDERIKSLVTDEVSLGDFVLTGGELAAMTMVDATVRLIPEVIGKETSHQDDSFSSGLLEYPQYTRPYDYLGMTVPDVLMSGHHENIRKWRLEQSLRKTLERRPDLLENYAMTDEERLILEKIKTEIERTDTVNEQNNL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

21W_B_8(4MCB)
TRMD_HAEIN
[Raw transfer]




SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]




21X_B_4(4MCC)
TRMD_HAEIN
[Raw transfer]




SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]




21X_A_3(4MCC)
TRMD_HAEIN
[Raw transfer]




SAH_A_2(1P9P)
TRMD_ECOLI
[Raw transfer]




21W_A_5(4MCB)
TRMD_HAEIN
[Raw transfer]




SAH_E_5(1UAM)
TRMD_HAEIN
[Raw transfer]




SFG_A_2(4YVH)
?
[Raw transfer]




SFG_A_4(4YVK)
?
[Raw transfer]




ADN_A_2(3AXZ)
TRMD_HAEIN
[Raw transfer]




SAH_A_2(4IG6)
TRMD_ANAPZ
[Raw transfer]




SAM_C_3(1UAK)
TRMD_HAEIN
[Raw transfer]




SAM_A_2(4YVG)
?
[Raw transfer]




SFG_A_4(4YVI)
?
[Raw transfer]




SFG_A_4(4YVJ)
?
[Raw transfer]




22L_A_2(4MCD)
TRMD_HAEIN
[Raw transfer]




SFG_B_5(4YVJ)
?
[Raw transfer]




SFG_B_5(4YVK)
?
[Raw transfer]




SFG_B_5(4YVI)
?
[Raw transfer]




EDO_A_3(3QUV)
?
[Raw transfer]




EDO_B_6(3QUV)
?
[Raw transfer]




EDO_A_3(3QUV)
?
[Raw transfer]




55 Fugue 96.7449%-122 * C5 *1UAL 6.1 TRMD_HAEIN
1 PsiBlast_PDB 95.2150%-125 - C5 -1UAJ - TRMD_HAEIN -
9 PsiBlast_PDB 94.8950%-118 - C5 -4YVG 7.1 ?
3 PsiBlast_PDB 94.8850%-122 - C5 -1UAL 6.1 TRMD_HAEIN
13 PsiBlast_PDB 94.5750%-118 - C5 -4YVK 7.1 ?
21 PsiBlast_CBE 94.5550%-122 - C5 -4MCC 6.1 TRMD_HAEIN
10 PsiBlast_PDB 94.4750%-117 - C5 -4YVH 6.6 ?
2 PsiBlast_PDB 94.4250%-122 - C5 -1UAK 7.1 TRMD_HAEIN
22 PsiBlast_CBE 94.4150%-113 - C5 -4MCB 6.6 TRMD_HAEIN
11 PsiBlast_PDB 94.3950%-122 - C5 -4YVI 6.9 ?
12 PsiBlast_PDB 94.3050%-118 - C5 -4YVJ 6.9 ?
23 PsiBlast_CBE 93.7050%-112 - C5 -4YVK 5.7 ?
25 PsiBlast_CBE 93.6450%-113 - C5 -4YVI 6.2 ?
4 PsiBlast_PDB 93.5950%-117 - C5 -1UAM 6.4 TRMD_HAEIN
24 PsiBlast_CBE 93.4850%-114 - C5 -4YVJ 5.4 ?
8 PsiBlast_PDB 93.3450%-122 - C5 -3AXZ 5.4 TRMD_HAEIN
7 PsiBlast_PDB 93.2150%-118 - C5 -4MCD 5.4 TRMD_HAEIN
14 PsiBlast_PDB 92.1048%-120 - C5 -1P9P 6.3 TRMD_ECOLI
26 PsiBlast_CBE 89.6344%-123 - C5 -3QUV 2.9 ?
17 PsiBlast_PDB 88.6745%-119 - C5 -4IG6 7.0 TRMD_ANAPZ
33 HHSearch 88.2846%-126 - C5 -3QUV 3.2 ?
5 PsiBlast_PDB 87.0250%-121 - C5 -4MCB 6.5 TRMD_HAEIN
15 PsiBlast_PDB 86.7844%-127 - C5 -3QUV 3.2 ?
6 PsiBlast_PDB 86.7350%-123 - C5 -4MCC 6.2 TRMD_HAEIN