@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu01540: (2016-06-03 )
MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVRPTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWDKDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_B_6(5AUO)
?
[Raw transfer]




ACP_I_9(5AUP)
?
[Raw transfer]




ADP_B_7(3VX3)
?
[Raw transfer]




ADP_A_3(3VX3)
?
[Raw transfer]




ADP_A_3(3KB1)
?
[Raw transfer]




ADP_B_10(5AUN)
?
[Raw transfer]




ADP_B_10(5AUN)
?
[Raw transfer]




ACP_B_6(5AUP)
?
[Raw transfer]




ACP_I_9(5AUP)
?
[Raw transfer]




ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]




1 PsiBlast_PDB 91.7541%-108 - C2 -2PH1 - ? -
5 PsiBlast_PDB 89.8935%-124 - C2 -5AUO 7.3 ?
25 PsiBlast_CBE 89.1835%-125 - C2 -3VX3 7.3 ?
155 HHSearch 89.1131%-102 - C2 -5AUN 7.2 ?
4 PsiBlast_PDB 89.0735%-124 - C2 -5AUN 7.2 ?
2 PsiBlast_PDB 88.9141%-106 - C2 -3KB1 5.2 ?
7 PsiBlast_PDB 88.5535%-130 - C2 -5AUQ - ? -
24 PsiBlast_CBE 87.6735%-123 - C2 -5AUP 7.2 ?
3 PsiBlast_PDB 87.5735%-125 - C2 -3VX3 6.7 ?
6 PsiBlast_PDB 87.5535%-123 - C2 -5AUP 1.4 ?
23 PsiBlast_CBE 84.8135%-131 - C2 -5AUQ - ? -
156 HHSearch 84.1237% -80 - C2 -2PH1 - ? -
152 HHSearch 80.2525% -77 - C2 -1HYQ - ? -
8 PsiBlast_PDB 77.5127% -84 - C3 -4V03 - ? -
18 PsiBlast_PDB 77.4923% -83 - C2 -3Q9L - MIND_ECOLI -
19 PsiBlast_PDB 76.7723% -84 - C2 -3R9I - MIND_ECOLI -
154 HHSearch 76.7225% -79 - C2 -4V03 - ? -
9 PsiBlast_PDB 75.2927% -81 - C3 -4V02 - ? -
20 PsiBlast_PDB 74.7723% -89 - C2 -3R9J - MIND_ECOLI -
149 HHSearch 74.2420% -78 - C2 -1G3Q - ? -