@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0535: (2016-04-23 )
MHNNGRMLGVIGGSGFYTFFGSDTRTVNSDTPYGQPSAPITIGTIGVHDVAFLPRHGAHHQYSAHAVPYRANMWALRALGVRRVFGPCAVGSLDPELEPGAVVVPDQLVDRTSGRADTYFDFGGVHAAFADPYCPTLRAAVTGLPGVVDGGTMVVIQGPRFSTRAESQWFAAAGCNLVNMTGYPEAVLARELELCYAAIALVTDVDAGVAAGDGVKAADVFAAFGENIELLKRLVRAAIDRVADERTCTHCQHHAGVPLPFELP

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MTA_G_7(1CG6)
MTAP_HUMAN
[Raw transfer]




MTM_G_7(1K27)
MTAP_HUMAN
[Raw transfer]




4CT_A_2(3OZC)
MTAP_HUMAN
[Raw transfer]




FMC_D_4(1SD1)
MTAP_HUMAN
[Raw transfer]




MTH_G_7(1SD2)
MTAP_HUMAN
[Raw transfer]




4CT_A_3(3OZD)
MTAP_HUMAN
[Raw transfer]




ADE_D_4(1CB0)
MTAP_HUMAN
[Raw transfer]




ADE_A_3(1WTA)
MTAP_AERPE
[Raw transfer]




ADE_A_3(1WTA)
MTAP_AERPE
[Raw transfer]




4CT_B_4(3OZD)
MTAP_HUMAN
[Raw transfer]




ADE_D_4(1CB0)
MTAP_HUMAN
[Raw transfer]




RHB_A_2(4GLJ)
?
[Raw transfer]




RHB_A_2(4GLJ)
?
[Raw transfer]




1 PsiBlast_PDB 97.0542%-125 - C2 -3T94 - MTAP_SULSO -
21 PsiBlast_CBE 96.7142%-126 - C2 -3T94 - MTAP_SULSO -
23 PsiBlast_CBE 96.6542%-124 - C2 -3T94 - MTAP_SULSO -
25 PsiBlast_CBE 96.4342%-125 - C2 -3T94 - MTAP_SULSO -
5 PsiBlast_PDB 96.3442%-125 - C2 -1WTA 3.5 MTAP_AERPE
22 PsiBlast_CBE 95.9942%-125 - C2 -3T94 - MTAP_SULSO -
24 PsiBlast_CBE 95.9642%-125 - C2 -3T94 - MTAP_SULSO -
62 HHSearch 94.1642%-114 - C2 -2A8Y - MTAP_SULSO -
2 PsiBlast_PDB 93.9242%-125 - C2 -1V4N - ? -
69 HHSearch 93.7242%-114 - C2 -1WTA 3.5 MTAP_AERPE
67 HHSearch 92.3137%-111 - C2 -4L5C - ? -
71 HHSearch 90.6437%-112 * C2 *1CB0 3.6 MTAP_HUMAN
80 Fugue 89.9535%-112 - C2 -4L5C - ? -
13 PsiBlast_PDB 89.6537%-112 - C2 -3OZE - MTAP_HUMAN -
11 PsiBlast_PDB 89.3437%-114 - C2 -3OZC 6.8 MTAP_HUMAN
28 PsiBlast_CBE 89.0537%-114 - C2 -3OZE - MTAP_HUMAN -
8 PsiBlast_PDB 88.9137%-110 - C2 -1K27 5.4 MTAP_HUMAN
7 PsiBlast_PDB 88.8637%-112 - C2 -1CG6 5.6 MTAP_HUMAN
6 PsiBlast_PDB 88.6537%-114 - C2 -1CB0 3.6 MTAP_HUMAN
66 HHSearch 88.5538%-107 - C2 -4GLJ 5.9 ?
12 PsiBlast_PDB 88.4037%-109 - C2 -3OZD 5.9 MTAP_HUMAN
9 PsiBlast_PDB 87.9737%-110 - C2 -1SD1 5.1 MTAP_HUMAN
10 PsiBlast_PDB 87.1037%-110 - C2 -1SD2 5.7 MTAP_HUMAN
31 PsiBlast_CBE 86.9737%-107 - C2 -3OZD 5.2 MTAP_HUMAN
4 PsiBlast_PDB 86.5839%-107 - C2 -4GLJ 5.9 ?