@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0562: (2016-04-23 )
MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]



2DE_B_8(3AQC)
HEXB_MICLU
[Raw transfer]



IPE_A_4(4LLT)
?
[Raw transfer]



IPE_B_13(3Q1O)
?
[Raw transfer]



IPE_A_7(3Q1O)
?
[Raw transfer]



IPE_C_18(3Q1O)
?
[Raw transfer]



DST_D_11(3KRO)
?
[Raw transfer]



IPE_D_24(3Q1O)
?
[Raw transfer]



DST_D_11(3KRF)
?
[Raw transfer]



IPE_B_9(4LLT)
?
[Raw transfer]



IPE_B_7(3OYR)
?
[Raw transfer]



DST_A_6(3OAB)
?
[Raw transfer]



GST_A_4(4LLS)
?
[Raw transfer]



DST_D_11(3OAB)
?
[Raw transfer]



DST_D_6(3OAC)
?
[Raw transfer]



GPP_D_9(3KRP)
?
[Raw transfer]



GST_B_9(4LLS)
?
[Raw transfer]



GOL_A_2(3LK5)
?
[Raw transfer]



IPE_A_2(3Q2Q)
?
[Raw transfer]



PPV_A_5(3KRP)
?
[Raw transfer]



PPV_A_6(3KRF)
?
[Raw transfer]



PPV_A_6(3KRO)
?
[Raw transfer]



IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]



IPE_B_4(3OYR)
?
[Raw transfer]



CIT_A_3(3PKO)
?
[Raw transfer]



IPE_A_4(3WJO)
?
[Raw transfer]



POP_A_3(3OYR)
?
[Raw transfer]



POP_A_3(3OYR)
?
[Raw transfer]



POP_A_3(3OYR)
?
[Raw transfer]
2 PsiBlast_PDB 93.5551% -97 - C1 -3Q2Q 2.4 ?
1 PsiBlast_PDB 92.5351% -96 - C1 -3LMD - ? -
56 HHSearch 89.1151% -95 - C1 -3LMD - ? -
52 HHSearch 76.1331% -95 - C1 -4LOB - ? -
55 HHSearch 75.5634%-108 - C1 -3OYR 3.4 ?
60 HHSearch 74.9230% -89 - C1 -1WY0 - ? -
58 HHSearch 74.3031% -94 - C1 -3APZ - SPS3_ARATH -
80 Fugue 73.0332%-100 - C1 -3OYR 3.4 ?
51 HHSearch 72.4129% -95 * C1 *4JXY - ? -
4 PsiBlast_PDB 69.9331% -86 - C1 -1WY0 - ? -
31 PsiBlast_CBE 69.7932% -97 - C1 -3AQ0 - SPS3_ARATH -
33 PsiBlast_CBE 69.4032% -97 - C1 -3AQ0 - SPS3_ARATH -
62 HHSearch 68.1427% -86 - C1 -3NF2 - ? -
32 PsiBlast_CBE 67.5232% -83 - C1 -3AQ0 - SPS3_ARATH -
6 PsiBlast_PDB 66.9436% -98 - C1 -3OYR 3.4 ?
66 HHSearch 66.6730% -88 - C1 -4DHD - ? -
57 HHSearch 66.6125% -84 - C1 -3AQB - HEXB_MICLU -
21 PsiBlast_CBE 66.5132% -89 - C1 -3WJN - ? -
9 PsiBlast_PDB 66.1732% -83 - C1 -3AQ0 - SPS3_ARATH -
22 PsiBlast_CBE 65.5936% -72 - C1 -3OYR 5.4 ?
3 PsiBlast_PDB 64.7732% -89 - C1 -3WJO 2.4 ?
17 PsiBlast_PDB 34.5434% -48 - C1 -3KRF 3.3 ?
19 PsiBlast_PDB 34.2534% -44 - C1 -3KRP 3.5 ?
38 PsiBlast_CBE 33.9034% -37 - C1 -3KRF 3.2 ?
37 PsiBlast_CBE 33.0134% -37 - C1 -3KRO 3.3 ?
18 PsiBlast_PDB 32.9834% -44 - C1 -3KRO 3.2 ?
20 PsiBlast_PDB 32.8334% -47 - C1 -3OAB 3.1 ?
35 PsiBlast_CBE 32.6734% -38 - C1 -3OAB 2.9 ?
34 PsiBlast_CBE 31.7434% -37 - C1 -3OAC 2.8 ?
36 PsiBlast_CBE 31.7134% -45 - C1 -3KRP 4.4 ?
43 PsiBlast_CBE 29.2133% -45 - C1 -4LLS 5.6 ?
42 PsiBlast_CBE 28.1233% -45 - C1 -4LLS 5.3 ?
40 PsiBlast_CBE 27.2033% -44 - C1 -4LLT 2.7 ?
47 PsiBlast_CBE 27.0131% -52 - C1 -3Q1O 3.4 ?
41 PsiBlast_CBE 26.7633% -41 - C1 -4LLT 3.1 ?
45 PsiBlast_CBE 23.3931% -45 - C1 -3Q1O 3.9 ?
46 PsiBlast_CBE 22.8331% -49 - C1 -3Q1O 4.0 ?
48 PsiBlast_CBE 22.7831% -47 - C1 -3Q1O 4.4 ?