@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1600: (2016-05-03 )
MTRSGHPVTLDDLPLRADLRGKAPYGAPQLAVPVRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVPSYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPGIAIVDEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSDDTLSSVAALIAERERVTTSLNDMGFRVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVGIPGYLRATTGLAEENDAFLRASARIATDLVPVTRSPVGAP

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_B_13(3CQ5)
HIS8_CORGL
[Raw transfer]




PMP_A_11(3CQ5)
HIS8_CORGL
[Raw transfer]




PMP_A_2(1FG7)
HIS8_ECOLI
[Raw transfer]




PMP_A_2(1FG7)
HIS8_ECOLI
[Raw transfer]




PLP_B_8(4R8D)
HIS8_MYCTU
[Raw transfer]




PMP_C_15(3CQ5)
HIS8_CORGL
[Raw transfer]




PMP_A_2(1FG7)
HIS8_ECOLI
[Raw transfer]




PLP_A_3(4R8D)
HIS8_MYCTU
[Raw transfer]




PMP_B_5(1UU2)
HIS8_THEMA
[Raw transfer]




PLP_C_3(1GEX)
HIS8_ECOLI
[Raw transfer]




PLP_A_3(1IJI)
HIS8_ECOLI
[Raw transfer]




PLP_A_3(1IJI)
HIS8_ECOLI
[Raw transfer]




PLP_A_3(1GEW)
HIS8_ECOLI
[Raw transfer]




PMP_A_3(1UU2)
HIS8_THEMA
[Raw transfer]




EDO_A_6(3EZS)
?
[Raw transfer]




144_C_14(3CQ5)
HIS8_CORGL
[Raw transfer]




HSA_E_5(1GEX)
HIS8_ECOLI
[Raw transfer]




PLP_A_2(1FG3)
HIS8_ECOLI
[Raw transfer]




144_A_12(3CQ5)
HIS8_CORGL
[Raw transfer]




21 PsiBlast_CBE 97.25100%-106 - C1 -4R8D 4.5 HIS8_MYCTU
43 HHSearch 96.31100%-107 - C1 -4R8D 4.7 HIS8_MYCTU
1 PsiBlast_PDB 96.31100%-107 - C1 -4R8D - HIS8_MYCTU -
2 PsiBlast_PDB 93.01100%-109 - C1 -4RAE - HIS8_MYCTU -
23 PsiBlast_CBE 86.1662%-103 - C1 -3CQ5 6.7 HIS8_CORGL
3 PsiBlast_PDB 84.2462%-103 - C1 -3CQ5 - HIS8_CORGL -
22 PsiBlast_CBE 84.2362%-101 - C1 -3CQ5 6.3 HIS8_CORGL
5 PsiBlast_PDB 83.6062%-102 - C1 -3CQ6 - HIS8_CORGL -
26 PsiBlast_CBE 83.2462%-107 - C1 -3CQ6 - HIS8_CORGL -
44 HHSearch 83.2160%-106 * C1 *3CQ5 6.1 HIS8_CORGL
25 PsiBlast_CBE 82.8162%-104 - C1 -3CQ6 - HIS8_CORGL -
4 PsiBlast_PDB 79.7162%-106 - C1 -3CQ4 - HIS8_CORGL -
24 PsiBlast_CBE 79.0162%-108 - C1 -3CQ4 - HIS8_CORGL -
38 PsiBlast_CBE 62.9633% -95 - C1 -4R5Z - PATR_MYCTU -
37 PsiBlast_CBE 62.2533% -91 - C1 -4R5Z - PATR_MYCTU -
42 PsiBlast_CBE 62.2233% -92 - C1 -4R2N - PATR_MYCTU -
40 PsiBlast_CBE 62.1533% -92 - C1 -4R2N - PATR_MYCTU -
11 PsiBlast_PDB 61.1433% -93 - C1 -4R2N - PATR_MYCTU -
39 PsiBlast_CBE 61.0033% -91 - C1 -4R5Z - PATR_MYCTU -
12 PsiBlast_PDB 60.7133% -90 - C1 -4R5Z - PATR_MYCTU -
65 Fugue 60.0532%-100 - C1 -1IJI 5.5 HIS8_ECOLI
66 Fugue 58.0532%-100 - C1 -1FG7 4.0 HIS8_ECOLI
15 PsiBlast_PDB 55.4232% -97 - C1 -1IJI 5.5 HIS8_ECOLI
14 PsiBlast_PDB 55.0032% -98 - C1 -1GEX 6.2 HIS8_ECOLI
19 PsiBlast_PDB 53.6531% -94 - C1 -1FG7 5.3 HIS8_ECOLI
18 PsiBlast_PDB 52.2331% -93 - C1 -1FG3 6.1 HIS8_ECOLI
13 PsiBlast_PDB 50.5932% -97 - C1 -1GEW 4.3 HIS8_ECOLI
51 HHSearch 47.1631% -89 - C1 -1FG7 5.3 HIS8_ECOLI
9 PsiBlast_PDB 43.5231% -95 - C1 -1UU2 5.7 HIS8_THEMA
30 PsiBlast_CBE 37.4331% -87 - C1 -1UU2 5.3 HIS8_THEMA