@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1941: (2016-05-06 )
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_C_7(2PD6)
DHB8_HUMAN
[Raw transfer]



NAD_D_8(2PD6)
DHB8_HUMAN
[Raw transfer]



NAD_A_5(2PD6)
DHB8_HUMAN
[Raw transfer]



NAD_B_6(2PD6)
DHB8_HUMAN
[Raw transfer]



1PS_B_6(4URE)
?
[Raw transfer]



THJ_A_4(3GED)
?
[Raw transfer]
5 PsiBlast_PDB 84.9041% -96 - C1 -4NPC - ? -
19 PsiBlast_PDB 84.2336%-106 - C1 -1NFF - HSD_MYCTU -
27 PsiBlast_CBE 83.7541% -95 - C1 -4NPC - ? -
20 PsiBlast_PDB 82.6036%-105 - C1 -1NFQ - HSD_MYCTU -
61 PsiBlast_CBE 82.4136%-103 - C1 -1NFQ - HSD_MYCTU -
29 PsiBlast_CBE 81.4736%-104 - C1 -2ZAT - DHRS4_PIG -
60 PsiBlast_CBE 81.3836%-104 - C1 -1NFQ - HSD_MYCTU -
3 PsiBlast_PDB 81.2939% -99 - C1 -4NBV - ? -
62 PsiBlast_CBE 80.9936%-105 - C1 -1NFQ - HSD_MYCTU -
25 PsiBlast_CBE 80.3638%-100 - C1 -4WEC - ? -
28 PsiBlast_CBE 80.0136%-101 - C1 -2ZAT - DHRS4_PIG -
63 PsiBlast_CBE 79.9936%-103 - C1 -1NFF - HSD_MYCTU -
47 PsiBlast_CBE 79.6135%-104 - C1 -2ZTM - ? -
51 PsiBlast_CBE 79.4534% -95 - C1 -1IY8 - LVR_LEIAQ -
54 PsiBlast_CBE 79.3634% -96 - C1 -1IY8 - LVR_LEIAQ -
41 PsiBlast_CBE 79.0936%-107 - C1 -3TZQ - ? -
30 PsiBlast_CBE 79.0936%-102 - C1 -2ZAT - DHRS4_PIG -
16 PsiBlast_PDB 79.0134% -96 - C1 -1IY8 - LVR_LEIAQ -
140 HHSearch 78.9434% -98 - C1 -4J2H - ? -
38 PsiBlast_CBE 78.9336%-106 - C1 -3TZQ - ? -
66 PsiBlast_CBE 76.3836%-111 - C1 -2PD6 9.0 DHB8_HUMAN
64 PsiBlast_CBE 75.1736%-110 - C1 -2PD6 9.9 DHB8_HUMAN
105 PsiBlast_CBE 73.0435% -93 - C1 -4URE 3.7 ?
65 PsiBlast_CBE 72.1036%-106 - C1 -2PD6 10.0 DHB8_HUMAN
67 PsiBlast_CBE 71.0036%-111 - C1 -2PD6 10.2 DHB8_HUMAN