@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3174: (2016-05-17 )
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYAATRNPLAIDVSDPRVIPLQLDVTDAVSVAEAADLATDVGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASAFADRIAERSGAIVNVSSVLAWLPLGMSYGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]




NAP_A_8(3RSH)
FABG_VIBCH
[Raw transfer]




NDP_A_3(3WXB)
?
[Raw transfer]




NDP_B_6(4WK6)
?
[Raw transfer]




NDP_D_8(4WK6)
?
[Raw transfer]




NDP_C_7(4WK6)
?
[Raw transfer]




NDP_A_5(4WK6)
?
[Raw transfer]




EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]




EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]




EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]




84 HHSearch 86.2929% -89 - C2 -3D3W - DCXR_HUMAN -
87 HHSearch 85.0428% -90 - C2 -1CYD - CBR2_MOUSE -
52 PsiBlast_CBE 79.2232% -79 - C2 -3D3W - DCXR_HUMAN -
19 PsiBlast_PDB 78.9432% -82 - C2 -1PR9 - DCXR_HUMAN -
56 PsiBlast_CBE 78.1732% -81 - C2 -1PR9 - DCXR_HUMAN -
20 PsiBlast_PDB 77.8432% -79 - C2 -1WNT - DCXR_HUMAN -
99 HHSearch 77.6628% -82 - C2 -2D1Y - ? -
85 HHSearch 77.2525% -88 - C2 -4RGB - ? -
81 HHSearch 76.1622% -94 - C2 -4ZA2 - ? -
54 PsiBlast_CBE 76.0432% -78 - C2 -1WNT - DCXR_HUMAN -
55 PsiBlast_CBE 75.8432% -78 - C2 -1WNT - DCXR_HUMAN -
91 HHSearch 75.1426% -89 - C2 -4HP8 - ? -
53 PsiBlast_CBE 74.9432% -77 - C2 -1WNT - DCXR_HUMAN -
75 PsiBlast_CBE 74.8731% -96 - C2 -2EHD - ? -
94 HHSearch 74.8324% -86 - C2 -4G81 - ? -
1 PsiBlast_PDB 73.9530% -79 - C2 -3WXB 12.5 ?
86 HHSearch 73.4324% -99 - C2 -4H15 - ? -
89 HHSearch 73.3723% -92 - C2 -3TZQ - ? -
90 HHSearch 73.2724% -83 - C2 -3WDS - ? -
93 HHSearch 72.6023% -87 - C2 -4E6P - ? -
26 PsiBlast_CBE 71.1434% -82 - C2 -3RRO 2.6 FABG_VIBCH
23 PsiBlast_CBE 71.0434% -89 - C2 -4WK6 4.5 ?
3 PsiBlast_PDB 70.1834% -92 - C2 -4WK6 6.1 ?
25 PsiBlast_CBE 69.7534% -82 - C2 -3RSH 9.0 FABG_VIBCH
4 PsiBlast_PDB 68.7934% -82 - C2 -3RSH 10.6 FABG_VIBCH
5 PsiBlast_PDB 68.6234% -81 - C2 -3RRO 2.9 FABG_VIBCH
22 PsiBlast_CBE 68.5534% -85 - C2 -4WK6 6.2 ?
21 PsiBlast_CBE 65.3334% -85 - C2 -4WK6 5.6 ?