@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3423c: (2016-05-19 )
MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(3OO2)
ALR1_STAAC
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



DCS_C_6(3E6E)
?
[Raw transfer]



DCS_A_4(3E6E)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]



PLP_B_4(1XFC)
ALR_MYCTU
[Raw transfer]



DCS_B_5(3E6E)
?
[Raw transfer]



PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]



DCS_A_3(4LUT)
?
[Raw transfer]



PLP_B_7(3E5P)
?
[Raw transfer]



PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_C_10(3E5P)
?
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]



GOL_A_10(4DYJ)
ALR_PSEPU
[Raw transfer]



GOL_B_18(4DYJ)
ALR_PSEPU
[Raw transfer]



GOL_B_18(4DYJ)
ALR_PSEPU
[Raw transfer]



ALA_B_6(4Y2W)
ALR1_CALS4
[Raw transfer]
1 PsiBlast_PDB 99.20100%-121 - C2 -1XFC 4.7 ALR_MYCTU
41 HHSearch 98.1297%-124 - C2 -1XFC 3.8 ALR_MYCTU
21 PsiBlast_CBE 96.19100%-120 - C2 -1XFC 3.9 ALR_MYCTU
12 PsiBlast_PDB 74.0430%-108 - C2 -4Y2W 3.3 ALR1_CALS4
48 HHSearch 73.9329%-106 - C2 -4Y2W - ALR1_CALS4 -
22 PsiBlast_CBE 72.4842%-114 - C2 -2DY3 - ALR_CORGL -
50 HHSearch 71.2136% -98 - C2 -4WR3 - ALR1_ECOLI -
4 PsiBlast_PDB 69.9933%-110 - C2 -4LUS - ? -
6 PsiBlast_PDB 69.7832%-106 - C2 -3OO2 - ALR1_STAAC -
2 PsiBlast_PDB 69.2934%-108 - C2 -4LUT 5.3 ?
30 PsiBlast_CBE 69.1637%-106 - C2 -3E5P 3.6 ?
35 PsiBlast_CBE 69.0635% -91 - C2 -4WR3 - ALR1_ECOLI -
13 PsiBlast_PDB 68.9435% -91 - C2 -4WR3 - ALR1_ECOLI -
14 PsiBlast_PDB 68.8635% -89 - C2 -4XBJ - ALR1_ECOLI -
34 PsiBlast_CBE 68.6835% -91 - C2 -4WR3 - ALR1_ECOLI -
47 HHSearch 68.6735%-101 - C2 -3E5P 4.0 ?
27 PsiBlast_CBE 68.4937%-107 - C2 -3E6E 5.6 ?
10 PsiBlast_PDB 68.1637%-104 - C2 -3E5P 4.1 ?
29 PsiBlast_CBE 68.1037%-105 - C2 -3E5P 3.4 ?
3 PsiBlast_PDB 67.9336%-105 - C2 -3HA1 - ? -
25 PsiBlast_CBE 67.4638% -97 - C2 -1BD0 7.8 ALR_GEOSE
43 HHSearch 67.4136% -97 - C2 -1BD0 7.4 ALR_GEOSE
8 PsiBlast_PDB 67.2438% -98 - C2 -1BD0 7.4 ALR_GEOSE
23 PsiBlast_CBE 67.0432%-108 - C2 -3OO2 Error ALR1_STAAC
11 PsiBlast_PDB 66.6437%-102 - C2 -3E6E 6.0 ?
7 PsiBlast_PDB 66.2438%-100 - C2 -1SFT 4.4 ALR_GEOSE
28 PsiBlast_CBE 65.8037%-100 - C2 -3E6E 5.2 ?
26 PsiBlast_CBE 65.6732%-109 - C2 -4A3Q 3.8 ALR1_STAAM
24 PsiBlast_CBE 64.8938% -97 - C2 -1SFT 4.5 ALR_GEOSE
45 HHSearch 64.0430% -90 - C2 -4DYJ 2.7 ALR_PSEPU
38 PsiBlast_CBE 63.1333% -88 - C2 -4DYJ 2.6 ALR_PSEPU
18 PsiBlast_PDB 63.1233% -90 - C2 -4DYJ 1.8 ALR_PSEPU
67 Fugue 45.5437% -81 * C2 *1BD0 6.9 ALR_GEOSE
68 Fugue 45.1437% -91 - C2 -1BD0 6.9 ALR_GEOSE