@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3158: (2016-02-14 )
MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHFTSEYKAAGYLEYEQARVRWFLSVDANDLPESVKGKKPTYRSITVNGEEMEFSEGFTDLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP7_B_9(3OA0)
?
[Raw transfer]



HP7_A_6(3OA0)
?
[Raw transfer]



AKG_B_9(3O9Z)
?
[Raw transfer]



AKG_A_6(3O9Z)
?
[Raw transfer]



NAD_A_5(3O9Z)
?
[Raw transfer]



NAD_C_13(3O9Z)
?
[Raw transfer]



NAD_A_5(3OA2)
WBPB_PSEAE
[Raw transfer]



NAD_B_8(3O9Z)
?
[Raw transfer]



NAD_B_8(3OA0)
?
[Raw transfer]



NAD_A_5(3O9Z)
?
[Raw transfer]



NAD_C_11(3OA0)
?
[Raw transfer]



NAD_C_7(3OA2)
WBPB_PSEAE
[Raw transfer]



NAD_C_7(3OA2)
WBPB_PSEAE
[Raw transfer]



NAD_C_7(3OA2)
WBPB_PSEAE
[Raw transfer]



NAD_D_8(3OA2)
WBPB_PSEAE
[Raw transfer]
22 PsiBlast_CBE 96.8699%-120 - C1 -3OA2 2.6 WBPB_PSEAE
1 PsiBlast_PDB 95.7899%-121 - C1 -3OA2 12.0 WBPB_PSEAE
68 Fugue 94.5197%-117 - C1 -3OA2 2.6 WBPB_PSEAE
21 PsiBlast_CBE 94.4799%-124 - C1 -3OA2 11.7 WBPB_PSEAE
46 HHSearch 93.0296%-117 - C1 -3OA2 2.6 WBPB_PSEAE
3 PsiBlast_PDB 83.4049%-113 - C1 -3OA0 4.9 ?
27 PsiBlast_CBE 83.3849%-114 - C1 -3O9Z 10.4 ?
25 PsiBlast_CBE 83.3249%-113 - C1 -3OA0 11.6 ?
24 PsiBlast_CBE 82.7149%-112 - C1 -3OA0 9.9 ?
2 PsiBlast_PDB 82.7149%-112 - C1 -3O9Z 10.8 ?
26 PsiBlast_CBE 82.2849%-114 - C1 -3O9Z - ? -
28 PsiBlast_CBE 82.1549%-114 - C1 -3O9Z 10.5 ?
23 PsiBlast_CBE 81.8649%-111 - C1 -3OA0 - ? -
49 HHSearch 72.3146% -94 - C1 -3O9Z 10.8 ?
6 PsiBlast_PDB 56.3223% -87 - C1 -3Q2K - ? -
65 HHSearch 56.0515% -87 - C1 -3GDO - IOLW_BACSU -
58 HHSearch 55.3518% -73 - C1 -3DB2 - ? -
61 HHSearch 54.5014% -91 - C1 -3M2T - ? -
47 HHSearch 54.3917% -76 * C1 *1ZH8 - ? -
51 HHSearch 52.4517% -86 - C1 -3KUX - ? -