@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1084: (2016-03-21 )
MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEKNPAYGIYQFSNSGTATWFEFATEILKDKDVTVNPCTSDEFPQKAERPKTSIMSLEKVEKLGFNIPTWQDALVRFKK

Atome Classification :

(20 SA) ---.........10........20.-..-------.....30------.....--....40........50........60-.........70........80........90........100.......110.......120.......130.......140.....-..150..---.....160...-....-170.......180.......190.----.....-.200-....----.....210.......220..--.---..-.-.-230----..--......240.......250.......-260.-..-..-----...270....----------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---MSILVTGANGQLGTELVQLLKE-HN-------LTVTEW-------DKDSV--DIVDKAAVKKAMLDLKPEWIIHCAA--FTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVI-RTSWVFG---KYGNNFVYSML-KLAE-THKELKVVNDQLGRPTYTYDLADF----IRFVI-EK---NPAY----GIYQFSNSGTATWFEFATEI--L---KD-K-D-VT-----VN--PCTSDEFPQKAERPKTSIMSLEKVEK-L-GF-NI-PT-----WQDALVRFKK----------
33 HHSearch 94.9343% -80 - C1 -1VL0 ? A:[13-287] ---MKILITGANGQLGREIQKQLKG-KN-------VEVIPT-------DVQDL--DITNVLAVNKFFNEKKPNVVINCAA--HTAVDKCEEQ-YDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIV-RTAWLYG---DG-NNFVKTMI-NLGK-THDELKVVHDQVGTPTSTVDLARV----VLKVI-DE----KNY----GTFHCTCKGICSWYDFAVEI--F---RLTGID-VK-----VT--PCTTEEFPRPAKRPKYSVLRNYMLEL-TTGD-IT-RE-----WKESLKEYI-----------
22 PsiBlast_CBE 93.5341% -81 - C1 -3SC6 ? E:[8-280] -----VIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT---S-LY----GTYHVSNTGSCSWFEFAKKI--F---SY-A-N-MK-----VNVLPVSTEEF---AARPKYSIFQHNMLRL-N-GFLQM-PS-----WEEGLERF------------
25 PsiBlast_CBE 92.7541% -84 - C1 -3SC6 ? B:[8-280] -----VIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT---S-LY----GTYHVSNTGSCSWFEFAKKI--F---SY-A-N-MK-----VNVLPVST----AAAARPKYSIFQHNMLRL-N-GFLQM-PS-----WEEGLERF------------
24 PsiBlast_CBE 90.7541% -80 - C1 -3SC6 ? C:[8-280] -----VIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT---S-LY----GTYHVSNTGSCSWFEFAKKI--F---SY-A-N-MK-----VNVLPVSTEEFGAAAARPKYSIFQHNMLRL-N-GFLQM-PS-----WEEGLERF------------
1 PsiBlast_PDB 90.2241% -78 - C1 -3SC6 ? A:[8-280] -----VIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT---S-LY----GTYHVSNTGSCSWFEFAKKI--F---SY-A-N-MK-----VNVLPVSTEEFGAAAARPKYSIFQHNMLRL-N-GFLQM-PS-----WEEGLERF------------
23 PsiBlast_CBE 88.9641% -76 - C1 -3SC6 ? D:[8-280] -----VIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT---S-LY----GTYHVSNTGSCSWFEFAKKI--F---SY-A-N-MK-----VNVLPVSTEEFGAAAARPKYSIFQHNMLRL-N-GFLQM-PS-----WEEGLERF------------
32 HHSearch 86.9642% -76 - C1 -3SC6 ? A:[6-282] ---ERVIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT----SLY----GTYHVSNTGSCSWFEFAKKI--F---SYAN-MKVN-----VL--PVSTEEFGAAAARPKYSIFQ-HNMLR-LNGF-LQMPS-----WEEGLERFFI----------
21 PsiBlast_CBE 85.7841% -77 - C1 -3SC6 ? F:[8-280] -----VIITGANGQLGKQLQEELNP-EE-------YDIYPF-------DKKLL--DITNISQVQQVVQEIRPHIIIHCAA--YTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIV-RTSWLYG---KYGNNFVKTMI-RLGK-EREEISVVADQIGSPTYVADLNVM----INKLI-HT---S-LY----GTYHVSNTGSCSWFEFAKKI--F---SY-A-N-MK-----VNVLPVSTEEFGAAAARPKYSIFQHNMLRL-N-GFLQM-PS-----WEEGLERF------------
2 PsiBlast_PDB 84.8445% -82 - C1 -1VL0 ? A:[15-263] -----ILITGANGQLGREIQKQLKG-KN-------VEVIPT-------DVQDL--DITNVLAVNKFFNEKKPNVVINCAA--HTAVDKCEEQY-DLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIV-RTAWLYG---D-GNNFVKTMI-NLGK-THDELKVVHDQVGTPTSTVDLARV----VLKVIDEK---N--Y----GTFHCTCKGICSWYDFAVEIFRL---TG-I-D-VK-----VT--PCTTEEFPRPAKRPKYSVL-------------------------------------------
55 Fugue 79.5134% -81 - C1 -4NDN MAT2B_HUMAN F:[15-323] IPNRRVLVTGATGLLGRAVHKEFQQ-NN-------WHAVGCGFRRARPKFEQV--NLLDSNAVHHIIHDFQPHVIVHCAAERRPDVDAAS--------QLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPP-YREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMF-DKVQFSNKSANMDHWQQRFPTHVKDVATV----CRQLA-EK---RMLDPSIKGTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVLGAQRPRNAQLDCSKLET-L-GI-GQ-RTPFRIGIKESLWPFLIDKRWRQTVFH
3 PsiBlast_PDB 79.1135% -70 - C1 -1KBZ - RMLD_SALTY A:[1-289] ---MNILLFGKTGQVGWELQRSLAPVGN-------LIALDV-------HSKEFCGDFSNPKGVAETVRKLRPDVIVNAAA--HTAVDKAESE-PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYA---GKGNNFAKTML-RLAK-ERQTLSVINDQYGAPTGAELLADCTAHAIRVAL-NK---PEVA----GLYHLVAGGTTTWHDYAALV--FDEARK-A-G-ITLALTELN--AVPTSAYPTPASRPGNSRLNTEKFQRNF-DL-IL-PQ-----WELGVKRM------------
10 PsiBlast_PDB 78.0031% -81 - C1 -4NDN MAT2B_HUMAN E:[20-294] -----VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP-------KFEQV--NLLDSNAVHHIIHDFQPHVIVHCAA--ERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMFDKVQF-SNKSANMDHWQQRFPTHVKDVATV----CRQLA-EKRMLDPSIK---GTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVLGAQRPRNAQLDCSKLET-L-GI-------------------------------
8 PsiBlast_PDB 76.4031% -80 - C1 -4KTV MAT2B_HUMAN E:[24-298] -----VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP-------KFEQV--NLLDSNAVHHIIHDFQPHVIVHCAA--ERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMFDKVQF-SNKSANMDHWQQRFPTHVKDVATV----CRQLA-EKRMLDPSIK---GTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVLGAQRPRNAQLDCSKLET-L-GI-------------------------------
7 PsiBlast_PDB 76.3231% -76 - C1 -4KTT - MAT2B_HUMAN E:[24-298] -----VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP-------KFEQV--NLLDSNAVHHIIHDFQPHVIVHCAA--ERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMFDKVQF-SNKSANMDHWQQRFPTHVKDVATV----CRQLA-EKRMLDPSIK---GTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVL--QRPRNAQLDCSKLET-L-GI-------------------------------
5 PsiBlast_PDB 76.1935% -69 - C1 -1KC3 RMLD_SALTY A:[1-289] ---MNILLFGKTGQVGWELQRSLAPVGN-------LIALDV-------HSKEFCGDFSNPKGVAETVRKLRPDVIVNAAA--HTAVDKAESE-PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYA---GKGNNFAKTML-RLAK-ERQTLSVINDQYGAPTGAELLADCTAHAIRVAL-NK---PEVA----GLYHLVAGGTTTWHDYAALV--FDEARK-A-G-ITLALTELN--AVPTSAYPTPASRPGNSRLNTEKFQRNF-DL-IL-PQ-----WELGVKRM------------
6 PsiBlast_PDB 75.8835% -68 - C1 -1N2S RMLD_SALTY A:[1-289] ---MNILLFGKTGQVGWELQRSLAPVGN-------LIALDV-------HSKEFCGDFSNPKGVAETVRKLRPDVIVNAAA--HTAVDKAESE-PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYA---GKGNNFAKTML-RLAK-ERQTLSVINDQYGAPTGAELLADCTAHAIRVAL-NK---PEVA----GLYHLVAGGTTTWHDYAALV--FDEARK-A-G-ITLALTELN--AVPTSAYPTPASRPGNSRLNTEKFQRNF-DL-IL-PQ-----WELGVKRM------------
26 PsiBlast_CBE 75.5831% -76 - C1 -2YDX MAT2B_HUMAN E:[5-278] -----VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP-------KFEQV--NLLDSNAVHHIIHDFQPHVIVHCAA--ERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMFDKVQF-SNKSANMDHWQQRFPTHVKDVATV----CRQLA-EKRMLDPSIK---GTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVLGAQRPRNAQLDCSKLET-L-G--------------------------------
4 PsiBlast_PDB 75.4835% -72 - C1 -1KC1 RMLD_SALTY A:[1-289] ---MNILLFGKTGQVGWELQRSLAPVGN-------LIALDV-------HSKEFCGDFSNPKGVAETVRKLRPDVIVNAAA--HTAVDKAESE-PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYA---GKGNNFAKTML-RLAK-ERQTLSVINDQYGAPTGAELLADCTAHAIRVAL-NK---PEVA----GLYHLVAGGTTTWHDYAALV--FDEARK-A-G-ITLALTELN--AVPTSAYPTPASRPGNSRLNTEKFQRNF-DL-IL-PQ-----WELGVKRM------------
28 PsiBlast_CBE 75.3231% -75 - C1 -2YDX MAT2B_HUMAN C:[5-278] -----VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP-------KFEQV--NLLDSNAVHHIIHDFQPHVIVHCAA--ERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMFDKVQF-SNKSANMDHWQQRFPTHVKDVATV----CRQLA-EKRMLDPSIK---GTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVLGAQRPRNAQLDCSKLET-L-G--------------------------------
9 PsiBlast_PDB 74.7831% -73 - C1 -2YDX MAT2B_HUMAN A:[5-278] -----VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP-------KFEQV--NLLDSNAVHHIIHDFQPHVIVHCAA--ERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVL-RIPILYGEVEKLEESAVTVMFDKVQF-SNKSANMDHWQQRFPTHVKDVATV----CRQLA-EKRMLDPSIK---GTFHWSGNEQMTKYEMACAI--A---DA-F-N-LPSSH--LR--PIT-DSPVLGAQRPRNAQLDCSKLET-L-G--------------------------------