@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00061_LACB_B: (2014-08-12 )
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MYR_A_2(3UEV)
LACB_BOVIN
[Raw transfer]




LMT_B_8(2R56)
LACB_BOVIN
[Raw transfer]




STE_A_2(3UEX)
LACB_BOVIN
[Raw transfer]




PLM_A_2(3UEW)
LACB_BOVIN
[Raw transfer]




CAT_A_2(4IB7)
LACB_BOVIN
[Raw transfer]




OLA_A_2(4DQ3)
LACB_BOVIN
[Raw transfer]




EIC_A_2(4DQ4)
LACB_BOVIN
[Raw transfer]




LMT_A_7(2R56)
LACB_BOVIN
[Raw transfer]




SDS_A_2(4GNY)
LACB_BOVIN
[Raw transfer]




SDS_A_2(4IBA)
LACB_BOVIN
[Raw transfer]




CAT_A_2(4IB9)
LACB_BOVIN
[Raw transfer]




SDS_A_2(4IB8)
LACB_BOVIN
[Raw transfer]




PLM_A_2(1GXA)
LACB_BOVIN
[Raw transfer]




RHL_A_2(4KII)
LACB_BOVIN
[Raw transfer]




DAO_A_2(3UEU)
LACB_BOVIN
[Raw transfer]




BRC_A_2(1BSO)
LACB_BOVIN
[Raw transfer]




DAO_A_2(4IB6)
LACB_BOVIN
[Raw transfer]




DKA_A_2(3NQ3)
LACB_BOVIN
[Raw transfer]




VD3_A_2(2GJ5)
LACB_BOVIN
[Raw transfer]




REA_A_2(1GX9)
LACB_BOVIN
[Raw transfer]




RTL_A_2(1GX8)
LACB_BOVIN
[Raw transfer]




PLM_C_3(1B0O)
LACB_BOVIN
[Raw transfer]




OCA_A_2(3NQ9)
LACB_BOVIN
[Raw transfer]




18 PsiBlast_PDB 97.76100%-125 - C4 -4GNY 4.9 LACB_BOVIN
14 PsiBlast_PDB 96.28100%-129 - C4 -3UEW 5.7 LACB_BOVIN
11 PsiBlast_PDB 95.85100%-119 - C4 -3NQ9 2.7 LACB_BOVIN
16 PsiBlast_PDB 95.12100%-133 - C4 -4DQ3 5.9 LACB_BOVIN
15 PsiBlast_PDB 95.06100%-129 - C4 -3UEX 6.3 LACB_BOVIN
20 PsiBlast_PDB 94.98100%-127 - C4 -4IBA 4.7 LACB_BOVIN
12 PsiBlast_PDB 94.78100%-131 - C4 -3UEU 4.5 LACB_BOVIN
10 PsiBlast_PDB 94.76100%-124 - C4 -3NQ3 4.1 LACB_BOVIN
27 PsiBlast_CBE 94.6298%-126 - C4 -4KII 7.2 LACB_BOVIN
29 PsiBlast_CBE 94.4898%-135 - C4 -4IB7 4.8 LACB_BOVIN
19 PsiBlast_PDB 94.36100%-127 - C4 -4IB9 4.7 LACB_BOVIN
7 PsiBlast_PDB 94.27100%-122 - C4 -2GJ5 4.8 LACB_BOVIN
17 PsiBlast_PDB 94.23100%-128 - C4 -4DQ4 6.1 LACB_BOVIN
13 PsiBlast_PDB 94.20100%-126 - C4 -3UEV 5.2 LACB_BOVIN
30 PsiBlast_CBE 93.7998%-129 - C4 -4IB6 4.3 LACB_BOVIN
4 PsiBlast_PDB 93.58100%-121 - C4 -1GX9 5.2 LACB_BOVIN
28 PsiBlast_CBE 93.4398%-129 - C4 -4IB8 4.4 LACB_BOVIN
6 PsiBlast_PDB 93.24100%-127 - C4 -1B0O 5.1 LACB_BOVIN
5 PsiBlast_PDB 93.09100%-122 - C4 -1GXA 5.0 LACB_BOVIN
3 PsiBlast_PDB 92.21100%-121 - C4 -1GX8 5.6 LACB_BOVIN
31 PsiBlast_CBE 91.8798%-120 - C4 -1BSO 5.1 LACB_BOVIN
21 PsiBlast_CBE 91.28100%-116 - C4 -2R56 4.6 LACB_BOVIN
8 PsiBlast_PDB 90.87100%-115 - C4 -2R56 4.0 LACB_BOVIN